RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-206ENST00000478251 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
GFM1-206ENST00000478251 WNT7AO00755 349 aa13.09□□□□□ -0.31
GFM1-206ENST00000478251 MTMR2Q13614 643 aa13.09□□□□□ -0.31
GFM1-206ENST00000478251 SUPT20HL1Q3ZLR7 823 aa13.09□□□□□ -0.31
GFM1-206ENST00000478251 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
GFM1-206ENST00000478251 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
GFM1-206ENST00000478251 ZSCAN16Q9H4T2 348 aaPredicted RBP13.09□□□□□ -0.31
GFM1-206ENST00000478251 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
GFM1-206ENST00000478251 TMEM232C9JQI7 657 aa13.08□□□□□ -0.31
GFM1-206ENST00000478251 GADD45BO75293 160 aaPredicted RBP13.08□□□□□ -0.31
GFM1-206ENST00000478251 BMP3P12645 472 aa13.08□□□□□ -0.31
GFM1-206ENST00000478251 NOL9Q5SY16 702 aaKnown RBP13.08□□□□□ -0.31
GFM1-206ENST00000478251 HEATR3Q7Z4Q2 680 aa13.08□□□□□ -0.31
GFM1-206ENST00000478251 ZNF526Q8TF50 670 aaPredicted RBP13.08□□□□□ -0.31
GFM1-206ENST00000478251 CLMNQ96JQ2 1002 aa13.08□□□□□ -0.31
GFM1-206ENST00000478251 BARHL2Q9NY43 387 aa13.08□□□□□ -0.31
GFM1-206ENST00000478251 M0R2N6 131 aa13.08□□□□□ -0.32
GFM1-206ENST00000478251 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.32
GFM1-206ENST00000478251 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
GFM1-206ENST00000478251 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.32
GFM1-206ENST00000478251 SPP2Q13103 211 aa13.08□□□□□ -0.32
GFM1-206ENST00000478251 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
GFM1-206ENST00000478251 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.32
GFM1-206ENST00000478251 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
GFM1-206ENST00000478251 COA7Q96BR5 231 aa13.08□□□□□ -0.32
GFM1-206ENST00000478251 RRP36Q96EU6 259 aaKnown RBP13.08□□□□□ -0.32
GFM1-206ENST00000478251 KIAA1683Q9H0B3 1180 aa13.08□□□□□ -0.32
GFM1-206ENST00000478251 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
GFM1-206ENST00000478251 ISY1Q9ULR0 285 aaKnown RBP13.08□□□□□ -0.32
GFM1-206ENST00000478251 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
GFM1-206ENST00000478251 TRIM29Q14134 588 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 NOSTRINQ8IVI9 506 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 HOOK2Q96ED9 719 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 GOPCQ9HD26 462 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 ZHX2Q9Y6X8 837 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 LOC285556D6RIA3 1793 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 MYH7BA7E2Y1 1941 aa13.07□□□□□ -0.32
GFM1-206ENST00000478251 TRIM75PA6NK02 468 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 GPT2Q8TD30 523 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 FEZ1Q99689 392 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 WDR18Q9BV38 432 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 GINM1Q9NU53 330 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
GFM1-206ENST00000478251 PRR12Q9ULL5 1215 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 ATP6V1DQ9Y5K8 247 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 CLIC4Q9Y696 253 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 DDX11L8A8MPP1 907 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 ZBTB5O15062 677 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 VCAM1P19320 739 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 CDC37Q16543 378 aaPredicted RBP13.06□□□□□ -0.32
GFM1-206ENST00000478251 BRAPQ7Z569 592 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 ZNF280CQ8ND82 737 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 LEO1Q8WVC0 666 aaPredicted RBP13.06□□□□□ -0.32
GFM1-206ENST00000478251 FOXP1Q9H334 677 aaPredicted RBP13.06□□□□□ -0.32
GFM1-206ENST00000478251 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
GFM1-206ENST00000478251 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 AFG3L2Q9Y4W6 797 aa13.06□□□□□ -0.32
GFM1-206ENST00000478251 PNMA6FA0A0J9YX94 578 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 HMGCS2P54868 508 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 BACE1P56817 501 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 KRT85P78386 507 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 PICK1Q9NRD5 415 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 KRT2P35908 639 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 STAT2P52630 851 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 NLRP5P59047 1200 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 PGBD1Q96JS3 809 aa13.05□□□□□ -0.32
GFM1-206ENST00000478251 SEC63Q9UGP8 760 aaKnown RBP13.05□□□□□ -0.32
GFM1-206ENST00000478251 OPLAHO14841 1288 aa13.04□□□□□ -0.32
GFM1-206ENST00000478251 NAPAP54920 295 aa13.04□□□□□ -0.32
GFM1-206ENST00000478251 TPRNQ4KMQ1 711 aa13.04□□□□□ -0.32
GFM1-206ENST00000478251 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
GFM1-206ENST00000478251 ELP3Q9H9T3 547 aa13.04□□□□□ -0.32
GFM1-206ENST00000478251 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
GFM1-206ENST00000478251 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
GFM1-206ENST00000478251 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
GFM1-206ENST00000478251 XBP1P17861 261 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
GFM1-206ENST00000478251 BLIDQ8IZY5 108 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 P2RX7Q99572 595 aaKnown RBP13.03□□□□□ -0.32
GFM1-206ENST00000478251 PCDHA6Q9UN73 950 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 PCDHA8Q9Y5H6 950 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 SMCO2A6NFE2 343 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 WDR46O15213 610 aaKnown RBP13.03□□□□□ -0.32
GFM1-206ENST00000478251 EDIL3O43854 480 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 TRAK2O60296 914 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 GJA5P36382 358 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 PTPAQ15257 358 aa13.03□□□□□ -0.32
GFM1-206ENST00000478251 SAFBQ15424 915 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms