RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, human

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS27A-208	ENST00000478196	SRSF3	P84103	164 aa	Known RBP	6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	TEK	Q02763	1124 aa		6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	TSNAXIP1	Q2TAA8	658 aa		6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	RNF141	Q8WVD5	230 aa		6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	LINC01599	Q8WXQ3	324 aa		6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	DACT3	Q96B18	629 aa	Predicted RBP	6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	EBF1	Q9UH73	591 aa		6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	MBD1	Q9UIS9	605 aa	Predicted RBP	6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	MTUS2	Q5JR59	1369 aa		6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	PHLDB1	Q86UU1	1377 aa		6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	NCOA2	Q15596	1464 aa		6.27	□□□□□ -1.41
RPS27A-208	ENST00000478196	ARHGEF12	Q9NZN5	1544 aa		6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	RBM47	A0AV96	593 aa	Known RBP	6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	OTOL1	A6NHN0	477 aa	Predicted RBP	6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	AFF3	P51826	1226 aa	Known RBP	6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	RPL6	Q02878	288 aa	Known RBP	6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	ADGRF1	Q5T601	910 aa		6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	DIEXF	Q68CQ4	756 aa	Known RBP	6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	PANK1	Q8TE04	598 aa		6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	SIRT5	Q9NXA8	310 aa		6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	SAMD9L	Q8IVG5	1584 aa		6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	ITSN2	Q9NZM3	1697 aa		6.26	□□□□□ -1.41
RPS27A-208	ENST00000478196	ARHGAP5	Q13017	1502 aa		6.25	□□□□□ -1.41
RPS27A-208	ENST00000478196	LRRN2	O75325	713 aa		6.25	□□□□□ -1.41
RPS27A-208	ENST00000478196	YARS	P54577	528 aa	Known RBP	6.25	□□□□□ -1.41
RPS27A-208	ENST00000478196	NLRX1	Q86UT6	975 aa		6.25	□□□□□ -1.41
RPS27A-208	ENST00000478196	GGN	Q86UU5	652 aa		6.25	□□□□□ -1.41
RPS27A-208	ENST00000478196	FAM13C	Q8NE31	585 aa		6.25	□□□□□ -1.41
RPS27A-208	ENST00000478196	ZNF281	Q9Y2X9	895 aa		6.25	□□□□□ -1.41
RPS27A-208	ENST00000478196	ABCC1	P33527	1531 aa		6.25	□□□□□ -1.41
RPS27A-208	ENST00000478196	ADGRL1	O94910	1474 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	N4BP3	O15049	544 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	RAPGEF3	O95398	923 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	ADRB1	P08588	477 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	EIF4B	P23588	611 aa	Known RBP	6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	LIG3	P49916	1009 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	GALK1	P51570	392 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	KRTAP10-2	P60368	255 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	NFKB2	Q00653	900 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	CLEC16A	Q2KHT3	1053 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	SIRT2	Q8IXJ6	389 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	RETREG2	Q8NC44	543 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	ASB16	Q96NS5	453 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	CRTAC1	Q9NQ79	661 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	SIGLEC1	Q9BZZ2	1709 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	ZMYM4	Q5VZL5	1548 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	POGZ	Q7Z3K3	1410 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	SCAPER	Q9BY12	1400 aa		6.24	□□□□□ -1.41
RPS27A-208	ENST00000478196	KDM5C	P41229	1560 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	CCNB3	Q8WWL7	1395 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	SLC22A31	A6NKX4	558 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	NOTO	A8MTQ0	251 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	UPK3BL1	B0FP48	263 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	UPK3BL2	E5RIL1	263 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	PLCG1	P19174	1290 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	EFCAB2	Q5VUJ9	269 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	OLFML2B	Q68BL8	750 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	SP8	Q8IXZ3	490 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	FEZF2	Q8TBJ5	459 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	G6PC3	Q9BUM1	346 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	ASPN	Q9BXN1	380 aa		6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	ZNF644	Q9H582	1327 aa	Predicted RBP	6.23	□□□□□ -1.41
RPS27A-208	ENST00000478196	DENND4B	O75064	1496 aa	Predicted RBP	6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	MBD5	Q9P267	1494 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	KIDINS220	Q9ULH0	1771 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	SYCP2	Q9BX26	1530 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	TNNI2	P48788	182 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	SLC14A2	Q15849	920 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	MAP3K11	Q16584	847 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	TMEM201	Q5SNT2	666 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	KRTAP5-3	Q6L8H2	238 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	ENOX1	Q8TC92	643 aa	Known RBP	6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	KREMEN1	Q96MU8	473 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	CNTD2	Q9H8S5	307 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	TRAPPC8	Q9Y2L5	1435 aa		6.22	□□□□□ -1.41
RPS27A-208	ENST00000478196	ARHGEF40	Q8TER5	1519 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	SHISA3	A0PJX4	238 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	ABLIM1	O14639	778 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	NRDC	O43847	1150 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	RLBP1	P12271	317 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	TFE3	P19532	575 aa	Predicted RBP	6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	VIPR1	P32241	457 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	KIR2DL1	P43626	348 aa	Predicted RBP	6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	KIR2DL2	P43627	348 aa	Predicted RBP	6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	EPHB3	P54753	998 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	RNF111	Q6ZNA4	994 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	SLFN12	Q8IYM2	578 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	ZDHHC14	Q8IZN3	488 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	JARID2	Q92833	1246 aa	Predicted RBP	6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	TEPSIN	Q96N21	525 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	ZMYM5	Q9UJ78	669 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	CORIN	Q9Y5Q5	1042 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	MYOM3	Q5VTT5	1437 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	KIAA1107	Q9UPP5	1409 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	CAMSAP2	Q08AD1	1489 aa		6.21	□□□□□ -1.42
RPS27A-208	ENST00000478196	YEATS2	Q9ULM3	1422 aa		6.2	□□□□□ -1.42
RPS27A-208	ENST00000478196	IRS4	O14654	1257 aa	Predicted RBP	6.2	□□□□□ -1.42
RPS27A-208	ENST00000478196	LDHB	P07195	334 aa	Known RBP	6.2	□□□□□ -1.42
RPS27A-208	ENST00000478196	RPL10	P27635	214 aa	Known RBP	6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms