RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 MAMDC4Q6UXC1 1216 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 SIRT2Q8IXJ6 389 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 NUP133Q8WUM0 1156 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 TEX13BQ9BXU2 312 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 STARD7Q9NQZ5 370 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 TMEM39AQ9NV64 488 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 ARPP21Q9UBL0 812 aaPredicted RBP11.59□□□□□ -0.55
CCM2-210ENST00000478169 FAM184BQ9ULE4 1060 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 DDX19BQ9UMR2 479 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 SLC4A4Q9Y6R1 1079 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 EYSQ5T1H1 3165 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.58□□□□□ -0.56
CCM2-210ENST00000478169 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.58□□□□□ -0.56
CCM2-210ENST00000478169 ATP2A1O14983 1001 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 RAD21O60216 631 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 ACLYP53396 1101 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 EPHB4P54760 987 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 FAAP100Q0VG06 881 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 ZNF467Q7Z7K2 595 aaPredicted RBP11.58□□□□□ -0.56
CCM2-210ENST00000478169 KLHDC9Q8NEP7 349 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
CCM2-210ENST00000478169 DDX11Q96FC9 970 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 CHMP4BQ9H444 224 aaKnown RBP11.58□□□□□ -0.56
CCM2-210ENST00000478169 ZBTB40Q9NUA8 1239 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
CCM2-210ENST00000478169 NYAP2Q9P242 653 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 ELP1O95163 1332 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 MROH7Q68CQ1 1323 aa11.58□□□□□ -0.56
CCM2-210ENST00000478169 DNAJC25-GNG10A0A024R161 153 aa11.57□□□□□ -0.56
CCM2-210ENST00000478169 DUSP11O75319 330 aaKnown RBP11.57□□□□□ -0.56
CCM2-210ENST00000478169 SNAI1O95863 264 aaPredicted RBP11.57□□□□□ -0.56
CCM2-210ENST00000478169 TIMP1P01033 207 aa11.57□□□□□ -0.56
CCM2-210ENST00000478169 CST5P28325 142 aaPredicted RBP11.57□□□□□ -0.56
CCM2-210ENST00000478169 KCNA10Q16322 511 aa11.57□□□□□ -0.56
CCM2-210ENST00000478169 SBK1Q52WX2 424 aa11.57□□□□□ -0.56
CCM2-210ENST00000478169 SNRNP48Q6IEG0 339 aaKnown RBP11.57□□□□□ -0.56
CCM2-210ENST00000478169 CCSAPQ6IQ19 270 aaPredicted RBP11.57□□□□□ -0.56
CCM2-210ENST00000478169 GIMAP6Q6P9H5 292 aa11.57□□□□□ -0.56
CCM2-210ENST00000478169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCM2-210ENST00000478169 PRPF38AQ8NAV1 312 aaKnown RBP11.57□□□□□ -0.56
CCM2-210ENST00000478169 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCM2-210ENST00000478169 PUS7LQ9H0K6 701 aaKnown RBP11.57□□□□□ -0.56
CCM2-210ENST00000478169 BCL11AQ9H165 835 aa11.57□□□□□ -0.56
CCM2-210ENST00000478169 SYNRGQ9UMZ2 1314 aa11.57□□□□□ -0.56
CCM2-210ENST00000478169 VCANP13611 3396 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 NCOR1O75376 2440 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 F5H6K3 240 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 CHGBP05060 677 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 RASA1P20936 1047 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 DNAJB2P25686 324 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 KLRC3Q07444 240 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 MFSD5Q6N075 450 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 CCDC174Q6PII3 467 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 PCSK9Q8NBP7 692 aaKnown RBP11.56□□□□□ -0.56
CCM2-210ENST00000478169 LENG1Q96BZ8 264 aaPredicted RBP11.56□□□□□ -0.56
CCM2-210ENST00000478169 GLT1D1Q96MS3 346 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
CCM2-210ENST00000478169 MKNK2Q9HBH9 465 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 SPC25Q9HBM1 224 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 FBXO40Q9UH90 709 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 ZHX1Q9UKY1 873 aaPredicted RBP11.56□□□□□ -0.56
CCM2-210ENST00000478169 TBX21Q9UL17 535 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 SYNPO2Q9UMS6 1093 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 RIPK3Q9Y572 518 aa11.56□□□□□ -0.56
CCM2-210ENST00000478169 CDH23Q9H251 3354 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 ZBED4O75132 1171 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 NDUFB10O96000 172 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 CDK7P50613 346 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 OAZ1P54368 228 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 PPIGQ13427 754 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCM2-210ENST00000478169 ACVR2BQ13705 512 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 GRIN2CQ14957 1233 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 MKL1Q969V6 931 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 NUP88Q99567 741 aaPredicted RBP11.55□□□□□ -0.56
CCM2-210ENST00000478169 UPF3AQ9H1J1 476 aaKnown RBP11.55□□□□□ -0.56
CCM2-210ENST00000478169 ABHD16BQ9H3Z7 469 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 ZNF576Q9H609 170 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 PRDM6Q9NQX0 595 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 COG6Q9Y2V7 657 aa11.55□□□□□ -0.56
CCM2-210ENST00000478169 CTDP1Q9Y5B0 961 aaPredicted RBP11.55□□□□□ -0.56
CCM2-210ENST00000478169 SPTBN5Q9NRC6 3674 aaKnown RBP11.54□□□□□ -0.56
CCM2-210ENST00000478169 IGKV6D-41A0A0C4DH26 115 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 GSG1L2A8MUP6 293 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 ASGR1P07306 291 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 C6orf222P0C671 652 aaPredicted RBP11.54□□□□□ -0.56
CCM2-210ENST00000478169 GJA9P57773 515 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 CPXCR1Q8N123 301 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 CHST13Q8NET6 341 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 TIFAQ96CG3 184 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCM2-210ENST00000478169 LRRCC1Q9C099 1032 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 SLC38A10Q9HBR0 1119 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 ZNF287Q9HBT7 754 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.54□□□□□ -0.56
CCM2-210ENST00000478169 CLIP2Q9UDT6 1046 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 FEM1BQ9UK73 627 aa11.54□□□□□ -0.56
CCM2-210ENST00000478169 GBF1Q92538 1859 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 A0A0U1RQG5 324 aaPredicted RBP11.53□□□□□ -0.56
CCM2-210ENST00000478169 MYADML2A6NDP7 307 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms