RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 CCDC178Q5BJE1 867 aa10.09□□□□□ -0.79
CDHR3-211ENST00000478080 ZFPM1Q8IX07 1006 aa10.09□□□□□ -0.79
CDHR3-211ENST00000478080 MORC2Q9Y6X9 1032 aaPredicted RBP10.09□□□□□ -0.79
CDHR3-211ENST00000478080 LRRC37AA6NMS7 1700 aa10.09□□□□□ -0.79
CDHR3-211ENST00000478080 G3V3G9 751 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 ZNF18P17022 549 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 NAPAP54920 295 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 NFIAQ12857 509 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 DCAF8Q5TAQ9 597 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 E4F1Q66K89 784 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-211ENST00000478080 PDXDC2PQ6P474 469 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 CCAR2Q8N163 923 aaKnown RBP10.08□□□□□ -0.8
CDHR3-211ENST00000478080 ENOX1Q8TC92 643 aaKnown RBP10.08□□□□□ -0.8
CDHR3-211ENST00000478080 SRCAPQ6ZRS2 3230 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 TOP1P11387 765 aaKnown RBP10.08□□□□□ -0.8
CDHR3-211ENST00000478080 SHROOM1Q2M3G4 852 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-211ENST00000478080 CDC42EP5Q6NZY7 148 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 CERS3Q8IU89 383 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 VSTM4Q8IW00 320 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 TRIML1Q8N9V2 468 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
CDHR3-211ENST00000478080 SMCO2A6NFE2 343 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 PDHBP11177 359 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 GABPAQ06546 454 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 IQUBQ8NA54 791 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 PKNOX2Q96KN3 472 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 SPZ1Q9BXG8 430 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 PDCL3Q9H2J4 239 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 PRDM10Q9NQV6 1147 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 TMEM260Q9NX78 707 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 MTMR4Q9NYA4 1195 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 BIN2Q9UBW5 565 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-211ENST00000478080 COL11A2P13942 1736 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-211ENST00000478080 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 CBFA2T2O43439 604 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 CEP135Q66GS9 1140 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 APOBEC3HQ6NTF7 200 aaKnown RBP10.07□□□□□ -0.8
CDHR3-211ENST00000478080 TMC4Q7Z404 712 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 KIAA0825Q8IV33 1275 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 CCDC150Q8NCX0 1101 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 CCDC148Q8NFR7 591 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 LRRC15Q8TF66 581 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 COA7Q96BR5 231 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 RRP36Q96EU6 259 aaKnown RBP10.07□□□□□ -0.8
CDHR3-211ENST00000478080 DACH1Q9UI36 760 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 MAPK8IP1Q9UQF2 711 aa10.07□□□□□ -0.8
CDHR3-211ENST00000478080 PLSCR1O15162 318 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 CHRNA5P30532 468 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 ALDH1B1P30837 517 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 PDE6BP35913 854 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 ATP2B2Q01814 1243 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 TCP10Q12799 353 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 PTPN14Q15678 1187 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 JAKMIP3Q5VZ66 844 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 NYAP1Q6ZVC0 841 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 MASTLQ96GX5 879 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 ZMYND12Q9H0C1 365 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 MPHOSPH10O00566 681 aaKnown RBP10.06□□□□□ -0.8
CDHR3-211ENST00000478080 TEX33O43247 280 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 CCNT1O60563 726 aaKnown RBP10.06□□□□□ -0.8
CDHR3-211ENST00000478080 GTF2F1P35269 517 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDHR3-211ENST00000478080 NT5C2P49902 561 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 ADKP55263 362 aaKnown RBP10.06□□□□□ -0.8
CDHR3-211ENST00000478080 ARL6IP4Q66PJ3 421 aaKnown RBP10.06□□□□□ -0.8
CDHR3-211ENST00000478080 TTBK2Q6IQ55 1244 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 DTHD1Q6ZMT9 781 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 DAGLBQ8NCG7 672 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 GSDMAQ96QA5 445 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 LZTS2Q9BRK4 669 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 SEC63Q9UGP8 760 aaKnown RBP10.06□□□□□ -0.8
CDHR3-211ENST00000478080 SERPINB13Q9UIV8 391 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 CTNND2Q9UQB3 1225 aa10.06□□□□□ -0.8
CDHR3-211ENST00000478080 FOCADQ5VW36 1801 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 ERCC5P28715 1186 aaPredicted RBP10.05□□□□□ -0.8
CDHR3-211ENST00000478080 SHMT1P34896 483 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 SLC16A2P36021 539 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 LONP1P36776 959 aaKnown RBP10.05□□□□□ -0.8
CDHR3-211ENST00000478080 STAT6P42226 847 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 NOVP48745 357 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 NAALADL2Q58DX5 795 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 RRAGBQ5VZM2 374 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 CCDC34Q96HJ3 373 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 PPP1R13BQ96KQ4 1090 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 GDAQ9Y2T3 454 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 SYNRGQ9UMZ2 1314 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 CRKP46108 304 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 SPATA1Q5VX52 437 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 TEKT1Q969V4 418 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 NRXN2Q9P2S2 1712 aa10.05□□□□□ -0.8
CDHR3-211ENST00000478080 IGKV6D-41A0A0C4DH26 115 aa10.04□□□□□ -0.8
CDHR3-211ENST00000478080 RAD21O60216 631 aa10.04□□□□□ -0.8
CDHR3-211ENST00000478080 RBM5P52756 815 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDHR3-211ENST00000478080 SOGA3Q5TF21 947 aa10.04□□□□□ -0.8
CDHR3-211ENST00000478080 APTXQ7Z2E3 356 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms