RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 HSF5Q4G112 596 aaPredicted RBP3.54□□□□□ -1.84
TMF1-202ENST00000477872 PHACTR4Q8IZ21 702 aa3.54□□□□□ -1.84
TMF1-202ENST00000477872 RETREG2Q8NC44 543 aa3.54□□□□□ -1.84
TMF1-202ENST00000477872 FCRL2Q96LA5 508 aaPredicted RBP3.54□□□□□ -1.84
TMF1-202ENST00000477872 KIF2CQ99661 725 aa3.54□□□□□ -1.84
TMF1-202ENST00000477872 USP40Q9NVE5 1235 aa3.54□□□□□ -1.84
TMF1-202ENST00000477872 REV1Q9UBZ9 1251 aa3.54□□□□□ -1.84
TMF1-202ENST00000477872 ACSL6Q9UKU0 697 aa3.54□□□□□ -1.84
TMF1-202ENST00000477872 TLR6Q9Y2C9 796 aa3.54□□□□□ -1.84
TMF1-202ENST00000477872 A0A1W2PQ45 241 aaPredicted RBP3.53□□□□□ -1.84
TMF1-202ENST00000477872 A0A1W2PQY0 241 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 FAM221AA4D161 298 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 NUDT19A8MXV4 375 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 RGS13O14921 159 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 FKTNO75072 461 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 PRKCAP17252 672 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 TNFRSF1AP19438 455 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 IGFBP6P24592 240 aaPredicted RBP3.53□□□□□ -1.84
TMF1-202ENST00000477872 NR1I3Q14994 352 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 TARBP2Q15633 366 aaKnown RBP3.53□□□□□ -1.84
TMF1-202ENST00000477872 NBPF9Q3BBW0 867 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 BBS9Q3SYG4 887 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 ZPBP2Q6X784 338 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 GATAD2BQ8WXI9 593 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 NOC4LQ9BVI4 516 aaKnown RBP3.53□□□□□ -1.84
TMF1-202ENST00000477872 TNFRSF12AQ9NP84 129 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 SRRDQ9UH36 339 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 KLHL3Q9UH77 587 aa3.53□□□□□ -1.84
TMF1-202ENST00000477872 HTR3BO95264 441 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 LIMS1P48059 325 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 MAPKAPK2P49137 400 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 ADAM17P78536 824 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 KIR3DS1Q14943 382 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 NT5DC1Q5TFE4 455 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 ZC3H14Q6PJT7 736 aaKnown RBP3.52□□□□□ -1.85
TMF1-202ENST00000477872 LIPIQ6XZB0 460 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 BNC2Q6ZN30 1099 aaPredicted RBP3.52□□□□□ -1.85
TMF1-202ENST00000477872 TMC3Q7Z5M5 1100 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 FERMT3Q86UX7 667 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 PHC3Q8NDX5 983 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 EAF1Q96JC9 268 aaPredicted RBP3.52□□□□□ -1.85
TMF1-202ENST00000477872 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.52□□□□□ -1.85
TMF1-202ENST00000477872 SUSD2Q9UGT4 822 aa3.52□□□□□ -1.85
TMF1-202ENST00000477872 C1QTNF3-AMACRE9PGA6 284 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 MATN3O15232 486 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 PRPF40AO75400 957 aaKnown RBP3.51□□□□□ -1.85
TMF1-202ENST00000477872 ITGB3P05106 788 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 P4HBP07237 508 aaKnown RBP3.51□□□□□ -1.85
TMF1-202ENST00000477872 MSL3P1P0C860 447 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 LMNB2Q03252 620 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 RAD51AP2Q09MP3 1159 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 CAMK2GQ13555 558 aaPredicted RBP3.51□□□□□ -1.85
TMF1-202ENST00000477872 MLECQ14165 292 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 VWA3BQ502W6 1294 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 NBPF12Q5TAG4 269 aaPredicted RBP3.51□□□□□ -1.85
TMF1-202ENST00000477872 RPTNQ6XPR3 784 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 SLCO6A1Q86UG4 719 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 LSRQ86X29 649 aaPredicted RBP3.51□□□□□ -1.85
TMF1-202ENST00000477872 SLC16A11Q8NCK7 471 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 NUP43Q8NFH3 380 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 FNIP1Q8TF40 1166 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 SMPD4Q9NXE4 827 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 GPR55Q9Y2T6 319 aaPredicted RBP3.51□□□□□ -1.85
TMF1-202ENST00000477872 GTF3C3Q9Y5Q9 886 aa3.51□□□□□ -1.85
TMF1-202ENST00000477872 SH3D21A4FU49 640 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 SIGLEC6O43699 453 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 GRIN3BO60391 1043 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 UBOX5O94941 541 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 PRAMEF1O95521 474 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 BRD1O95696 1058 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 FSHBP01225 129 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 ST13P50502 369 aaKnown RBP3.5□□□□□ -1.85
TMF1-202ENST00000477872 FOXO4P98177 505 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 TAF1CQ15572 869 aaPredicted RBP3.5□□□□□ -1.85
TMF1-202ENST00000477872 PLEKHN1Q494U1 663 aaPredicted RBP3.5□□□□□ -1.85
TMF1-202ENST00000477872 MEI1Q5TIA1 1274 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 CPZQ66K79 652 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 SAPCD2Q86UD0 394 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 SORCS2Q96PQ0 1159 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 SPATA25Q9BR10 227 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 ERVK13-1Q9NX77 482 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 POLR3KQ9Y2Y1 108 aaPredicted RBP3.5□□□□□ -1.85
TMF1-202ENST00000477872 PMF1-BGLAPU3KQ54 211 aa3.5□□□□□ -1.85
TMF1-202ENST00000477872 A0A1B0GTL3 188 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 A0A1W2PQ27 194 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 A0A1W2PQ64 194 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 A0A1W2PQC6 194 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 A0A1W2PQD8 194 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 NOBOXO60393 691 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 DNAJA2O60884 412 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 F13A1P00488 732 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 PF4P02776 101 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 BMP8BP34820 402 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 ZNF200P98182 395 aaPredicted RBP3.49□□□□□ -1.85
TMF1-202ENST00000477872 SNW1Q13573 536 aaKnown RBP3.49□□□□□ -1.85
TMF1-202ENST00000477872 PAQR3Q6TCH7 311 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 AEBP1Q8IUX7 1158 aa3.49□□□□□ -1.85
TMF1-202ENST00000477872 DDX1Q92499 740 aaKnown RBP3.49□□□□□ -1.85
TMF1-202ENST00000477872 RBM15Q96T37 977 aaKnown RBP eCLIP3.49□□□□□ -1.85
TMF1-202ENST00000477872 C1QTNF3Q9BXJ4 246 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms