RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 ATG4CQ96DT6 458 aa11.51□□□□□ -0.57
NIFK-205ENST00000477693 GMCL1Q96IK5 515 aa11.51□□□□□ -0.57
NIFK-205ENST00000477693 TTC14Q96N46 770 aa11.51□□□□□ -0.57
NIFK-205ENST00000477693 TM6SF1Q9BZW5 370 aa11.51□□□□□ -0.57
NIFK-205ENST00000477693 KRT23Q9C075 422 aa11.51□□□□□ -0.57
NIFK-205ENST00000477693 BTBD7Q9P203 1132 aa11.51□□□□□ -0.57
NIFK-205ENST00000477693 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
NIFK-205ENST00000477693 PARP14Q460N5 1801 aa11.51□□□□□ -0.57
NIFK-205ENST00000477693 B4E1Z4 1266 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 KDM4AO75164 1064 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
NIFK-205ENST00000477693 HMGB1P09429 215 aaKnown RBP11.5□□□□□ -0.57
NIFK-205ENST00000477693 PSMA5P28066 241 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 IRF5Q13568 498 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 RABEP1Q15276 862 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 SLC9C1Q4G0N8 1177 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 RCSD1Q6JBY9 416 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 PRPF38AQ8NAV1 312 aaKnown RBP11.5□□□□□ -0.57
NIFK-205ENST00000477693 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 NUP88Q99567 741 aaPredicted RBP11.5□□□□□ -0.57
NIFK-205ENST00000477693 SPATC1LQ9H0A9 340 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 PORCNQ9H237 461 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 FEM1BQ9UK73 627 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 GABRQQ9UN88 632 aa11.5□□□□□ -0.57
NIFK-205ENST00000477693 RBM8AQ9Y5S9 174 aaKnown RBP11.5□□□□□ -0.57
NIFK-205ENST00000477693 VWA5AO00534 786 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 PLA2G6O60733 806 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 TOP1P11387 765 aaKnown RBP11.49□□□□□ -0.57
NIFK-205ENST00000477693 BMP3P12645 472 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 SLC1A4P43007 532 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 FLT3LGP49771 235 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 NBPF11Q86T75 865 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 DGKHQ86XP1 1220 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 REPS2Q8NFH8 660 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 SOCS4Q8WXH5 440 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 ZNF333Q96JL9 665 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 SLF1Q9BQI6 1058 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 TMEM47Q9BQJ4 181 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 ZSWIM5Q9P217 1185 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 GJD2Q9UKL4 321 aa11.49□□□□□ -0.57
NIFK-205ENST00000477693 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 MCM2P49736 904 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 TRDNQ13061 729 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 MORN1Q5T089 497 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 LHX8Q68G74 356 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 CCAR1Q8IX12 1150 aaKnown RBP11.48□□□□□ -0.57
NIFK-205ENST00000477693 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 SHCBP1Q8NEM2 672 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 DCAF4Q8WV16 495 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 ANKS1AQ92625 1134 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 USP6NLQ92738 828 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 ZSCAN10Q96SZ4 725 aaPredicted RBP11.48□□□□□ -0.57
NIFK-205ENST00000477693 MOV10L1Q9BXT6 1211 aaKnown RBP11.48□□□□□ -0.57
NIFK-205ENST00000477693 ZNF214Q9UL59 606 aaPredicted RBP11.48□□□□□ -0.57
NIFK-205ENST00000477693 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 TAF6LQ9Y6J9 622 aa11.48□□□□□ -0.57
NIFK-205ENST00000477693 TNKSO95271 1327 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 E7EWF7 191 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 ATP2A1O14983 1001 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 ST18O60284 1047 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 SNHG28P0DPA3 235 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 FDX1P10109 184 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 PDHBP11177 359 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 XRCC5P13010 732 aaKnown RBP11.47□□□□□ -0.57
NIFK-205ENST00000477693 GRK4P32298 578 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 STAT2P52630 851 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 BECN1Q14457 450 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 CREB3L3Q68CJ9 461 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 PLEKHH3Q7Z736 793 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 FAM160B2Q86V87 743 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 RIOX2Q8IUF8 465 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 ENAHQ8N8S7 591 aaPredicted RBP11.47□□□□□ -0.57
NIFK-205ENST00000477693 CHURC1Q8WUH1 139 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 NUDT12Q9BQG2 462 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 MROH8Q9H579 483 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 SLC38A10Q9HBR0 1119 aa11.47□□□□□ -0.57
NIFK-205ENST00000477693 PLXNB2O15031 1838 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 SLC15A5A6NIM6 579 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 TMEM232C9JQI7 657 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 SLC27A2O14975 620 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 STRNO43815 780 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 ADCY3O60266 1144 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 SLC25A27O95847 323 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 ERCC3P19447 782 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 PTPREP23469 700 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 COPB2P35606 906 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 OAZ1P54368 228 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 GRB14Q14449 540 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 PLS1Q14651 629 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 STOX1Q6ZVD7 989 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 KCTD1Q719H9 257 aa11.46□□□□□ -0.57
NIFK-205ENST00000477693 RASGRP2Q7LDG7 609 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms