RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LETM1O95202 739 aaPredicted RBP13.96□□□□□ -0.17
PRPF39-203ENST00000477626 HLA-DOAP06340 250 aa13.96□□□□□ -0.17
PRPF39-203ENST00000477626 SARSP49591 514 aaKnown RBP13.96□□□□□ -0.17
PRPF39-203ENST00000477626 CERKLQ49MI3 558 aaPredicted RBP13.96□□□□□ -0.17
PRPF39-203ENST00000477626 CCAR1Q8IX12 1150 aaKnown RBP13.96□□□□□ -0.17
PRPF39-203ENST00000477626 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
PRPF39-203ENST00000477626 PFKFB1P16118 471 aa13.95□□□□□ -0.18
PRPF39-203ENST00000477626 GMPSP49915 693 aaPredicted RBP13.95□□□□□ -0.18
PRPF39-203ENST00000477626 PIGSQ96S52 555 aa13.95□□□□□ -0.18
PRPF39-203ENST00000477626 CUTAO60888 179 aa13.95□□□□□ -0.18
PRPF39-203ENST00000477626 MRPS27Q92552 414 aaKnown RBP13.95□□□□□ -0.18
PRPF39-203ENST00000477626 CSRNP1Q96S65 589 aa13.95□□□□□ -0.18
PRPF39-203ENST00000477626 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
PRPF39-203ENST00000477626 TNIP1Q15025 636 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 IQCB1Q15051 598 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 BLIDQ8IZY5 108 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 CLIC6Q96NY7 704 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 CLIP2Q9UDT6 1046 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 ZBTB21Q9ULJ3 1066 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 LOXHD1Q8IVV2 1947 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 BMP6P22004 513 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 CAP2P40123 477 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 CLRN2A0PK11 232 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 MTMR9Q96QG7 549 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 MTRQ99707 1265 aa13.94□□□□□ -0.18
PRPF39-203ENST00000477626 PNMA6FA0A0J9YX94 578 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 GPATCH4Q5T3I0 446 aaKnown RBP13.93□□□□□ -0.18
PRPF39-203ENST00000477626 USP49Q70CQ1 688 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 CABP5Q9NP86 173 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 GPRC5DQ9NZD1 345 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.93□□□□□ -0.18
PRPF39-203ENST00000477626 FRMPD2Q68DX3 1309 aaPredicted RBP13.93□□□□□ -0.18
PRPF39-203ENST00000477626 NDUFB10O96000 172 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 ABCB5Q2M3G0 1257 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 GPC2Q8N158 579 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 ARID2Q68CP9 1835 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 TCP10L2B9ZVM9 353 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 PPP4R3BQ5MIZ7 849 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 TRPM4Q8TD43 1214 aa13.93□□□□□ -0.18
PRPF39-203ENST00000477626 A0A1B0GVL5 298 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 GH2P01242 217 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 ECE1P42892 770 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 CEBPZQ03701 1054 aaKnown RBP13.92□□□□□ -0.18
PRPF39-203ENST00000477626 MICALL2Q8IY33 904 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 ZNF536O15090 1300 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 PITPNM2Q9BZ72 1349 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 MEIS2O14770 477 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 ZBTB5O15062 677 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 GDF11O95390 407 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 BPIFA3Q9BQP9 254 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 SYT17Q9BSW7 474 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 GLIS2Q9BZE0 524 aaPredicted RBP13.92□□□□□ -0.18
PRPF39-203ENST00000477626 RANBP17Q9H2T7 1088 aaKnown RBP13.92□□□□□ -0.18
PRPF39-203ENST00000477626 HDAC9Q9UKV0 1011 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 BCS1LQ9Y276 419 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 FRMPD4Q14CM0 1322 aa13.92□□□□□ -0.18
PRPF39-203ENST00000477626 NCLP19338 710 aaKnown RBP13.91□□□□□ -0.18
PRPF39-203ENST00000477626 ORC2Q13416 577 aaPredicted RBP13.91□□□□□ -0.18
PRPF39-203ENST00000477626 PDXDC2PQ6P474 469 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 DHX40Q8IX18 779 aaKnown RBP13.91□□□□□ -0.18
PRPF39-203ENST00000477626 ACER1Q8TDN7 264 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 USP17L10C9JJH3 530 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 ARL6IP4Q66PJ3 421 aaKnown RBP13.91□□□□□ -0.18
PRPF39-203ENST00000477626 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
PRPF39-203ENST00000477626 UBA5Q9GZZ9 404 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 NUP62CLQ9H1M0 184 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 CYP3A7-CYP3A51PA0A087WV96 503 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 F5H6K3 240 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 G3V3G9 751 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 ZNF202O95125 648 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 CYP3A7P24462 503 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 CALML3P27482 149 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 PRPHP41219 470 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 KLRC3Q07444 240 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 TEX2Q8IWB9 1127 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 FSIP1Q8NA03 581 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 SYAP1Q96A49 352 aaPredicted RBP13.91□□□□□ -0.18
PRPF39-203ENST00000477626 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
PRPF39-203ENST00000477626 MED15Q96RN5 788 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 CSRNP2Q9H175 543 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 TMEM60Q9H2L4 133 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 TSPY26PQ9H489 355 aa13.91□□□□□ -0.18
PRPF39-203ENST00000477626 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 LMNB1P20700 586 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 MARCKSP29966 332 aaPredicted RBP13.9□□□□□ -0.18
PRPF39-203ENST00000477626 EIF6P56537 245 aaKnown RBP13.9□□□□□ -0.18
PRPF39-203ENST00000477626 ICA1Q05084 483 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 TYRO3Q06418 890 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 LONRF3Q496Y0 759 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 L1TD1Q5T7N2 865 aaKnown RBP13.9□□□□□ -0.18
PRPF39-203ENST00000477626 POTEEQ6S8J3 1075 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 SOCS7O14512 581 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
PRPF39-203ENST00000477626 SAMD7Q7Z3H4 446 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms