RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 NT5C1AQ9BXI3 368 aa7.09□□□□□ -1.27
UBR3-209ENST00000477461 RTP1P59025 263 aa7.08□□□□□ -1.28
UBR3-209ENST00000477461 LRRFIP1Q32MZ4 808 aaKnown RBP7.08□□□□□ -1.28
UBR3-209ENST00000477461 FBXW10Q5XX13 1052 aa7.08□□□□□ -1.28
UBR3-209ENST00000477461 SLITRK4Q8IW52 837 aa7.08□□□□□ -1.28
UBR3-209ENST00000477461 PLCD4Q9BRC7 762 aa7.08□□□□□ -1.28
UBR3-209ENST00000477461 BACH2Q9BYV9 841 aa7.08□□□□□ -1.28
UBR3-209ENST00000477461 BCL11AQ9H165 835 aa7.08□□□□□ -1.28
UBR3-209ENST00000477461 GCM1Q9NP62 436 aa7.08□□□□□ -1.28
UBR3-209ENST00000477461 PCDHGB7Q9Y5F8 929 aa7.08□□□□□ -1.28
UBR3-209ENST00000477461 NRDCO43847 1150 aa7.07□□□□□ -1.28
UBR3-209ENST00000477461 KIR2DL1P43626 348 aaPredicted RBP7.07□□□□□ -1.28
UBR3-209ENST00000477461 KIR2DL2P43627 348 aaPredicted RBP7.07□□□□□ -1.28
UBR3-209ENST00000477461 SRSF3P84103 164 aaKnown RBP7.07□□□□□ -1.28
UBR3-209ENST00000477461 AUHQ13825 339 aaKnown RBP7.07□□□□□ -1.28
UBR3-209ENST00000477461 ZNF394Q53GI3 561 aa7.07□□□□□ -1.28
UBR3-209ENST00000477461 CDADC1Q9BWV3 514 aa7.07□□□□□ -1.28
UBR3-209ENST00000477461 FAM86C1Q9NVL1 165 aa7.07□□□□□ -1.28
UBR3-209ENST00000477461 CNOT6Q9ULM6 557 aaKnown RBP7.07□□□□□ -1.28
UBR3-209ENST00000477461 PCDHB12Q9Y5F1 795 aa7.07□□□□□ -1.28
UBR3-209ENST00000477461 ADAMTS20P59510 1910 aa7.07□□□□□ -1.28
UBR3-209ENST00000477461 TEX51A0A1B0GUA7 166 aa7.06□□□□□ -1.28
UBR3-209ENST00000477461 C9IYK1 514 aa7.06□□□□□ -1.28
UBR3-209ENST00000477461 TNFRSF10CO14798 259 aa7.06□□□□□ -1.28
UBR3-209ENST00000477461 PEX10O60683 326 aa7.06□□□□□ -1.28
UBR3-209ENST00000477461 ZNF76P36508 570 aa7.06□□□□□ -1.28
UBR3-209ENST00000477461 CTSKP43235 329 aa7.06□□□□□ -1.28
UBR3-209ENST00000477461 USP48Q86UV5 1035 aa7.06□□□□□ -1.28
UBR3-209ENST00000477461 AMIGO3Q86WK7 504 aa7.06□□□□□ -1.28
UBR3-209ENST00000477461 ACRP10323 421 aa7.05□□□□□ -1.28
UBR3-209ENST00000477461 CCNFP41002 786 aa7.05□□□□□ -1.28
UBR3-209ENST00000477461 TMCO4Q5TGY1 634 aa7.05□□□□□ -1.28
UBR3-209ENST00000477461 TDRD10Q5VZ19 366 aaKnown RBP7.05□□□□□ -1.28
UBR3-209ENST00000477461 CRTC3Q6UUV7 619 aa7.05□□□□□ -1.28
UBR3-209ENST00000477461 CCDC144CPQ8IYA2 1237 aa7.05□□□□□ -1.28
UBR3-209ENST00000477461 PANK1Q8TE04 598 aa7.05□□□□□ -1.28
UBR3-209ENST00000477461 AP5S1Q9NUS5 200 aa7.05□□□□□ -1.28
UBR3-209ENST00000477461 SIRT5Q9NXA8 310 aa7.05□□□□□ -1.28
UBR3-209ENST00000477461 GPR55Q9Y2T6 319 aaPredicted RBP7.05□□□□□ -1.28
UBR3-209ENST00000477461 ZBTB7CA1YPR0 619 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 FADS2P1A8MWK0 482 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 SEMA7AO75326 666 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 TP53P04637 393 aaPredicted RBP7.04□□□□□ -1.28
UBR3-209ENST00000477461 BMP7P18075 431 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 SSPNQ14714 243 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 LILRA6Q6PI73 481 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 RUFY4Q6ZNE9 571 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 BRF1Q92994 677 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 FERD3LQ96RJ6 166 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 DSCC1Q9BVC3 393 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 KCTD3Q9Y597 815 aa7.04□□□□□ -1.28
UBR3-209ENST00000477461 MEIS3P2A8K0S8 358 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 INHBBP09529 407 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 VAV1P15498 845 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 PNLIPP16233 465 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 VIPR1P32241 457 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
UBR3-209ENST00000477461 DCAF15Q66K64 600 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 C7orf61Q8IZ16 206 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 CRTAC1Q9NQ79 661 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 TNFRSF10DQ9UBN6 386 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 SUCOQ9UBS9 1254 aaKnown RBP7.03□□□□□ -1.28
UBR3-209ENST00000477461 MBD1Q9UIS9 605 aaPredicted RBP7.03□□□□□ -1.28
UBR3-209ENST00000477461 PPT2Q9UMR5 302 aa7.03□□□□□ -1.28
UBR3-209ENST00000477461 PRKCAP17252 672 aa7.02□□□□□ -1.29
UBR3-209ENST00000477461 EPHB3P54753 998 aa7.02□□□□□ -1.29
UBR3-209ENST00000477461 TTLL10Q6ZVT0 673 aa7.02□□□□□ -1.29
UBR3-209ENST00000477461 TMEM52Q8NDY8 209 aa7.02□□□□□ -1.29
UBR3-209ENST00000477461 FCRL2Q96LA5 508 aaPredicted RBP7.02□□□□□ -1.29
UBR3-209ENST00000477461 DHRS1Q96LJ7 313 aa7.02□□□□□ -1.29
UBR3-209ENST00000477461 ERVK13-1Q9NX77 482 aa7.02□□□□□ -1.29
UBR3-209ENST00000477461 ZNRF3Q9ULT6 936 aa7.02□□□□□ -1.29
UBR3-209ENST00000477461 TAF6LQ9Y6J9 622 aa7.02□□□□□ -1.29
UBR3-209ENST00000477461 WTIPA6NIX2 430 aaPredicted RBP7.01□□□□□ -1.29
UBR3-209ENST00000477461 GSTM1P09488 218 aa7.01□□□□□ -1.29
UBR3-209ENST00000477461 BMP8BP34820 402 aa7.01□□□□□ -1.29
UBR3-209ENST00000477461 FANCCQ00597 558 aa7.01□□□□□ -1.29
UBR3-209ENST00000477461 ZYXQ15942 572 aaKnown RBP7.01□□□□□ -1.29
UBR3-209ENST00000477461 NOL9Q5SY16 702 aaKnown RBP7.01□□□□□ -1.29
UBR3-209ENST00000477461 INTS3Q68E01 1043 aaKnown RBP7.01□□□□□ -1.29
UBR3-209ENST00000477461 GALNT18Q6P9A2 607 aa7.01□□□□□ -1.29
UBR3-209ENST00000477461 NUP43Q8NFH3 380 aa7.01□□□□□ -1.29
UBR3-209ENST00000477461 CNTD2Q9H8S5 307 aa7.01□□□□□ -1.29
UBR3-209ENST00000477461 NUDT19A8MXV4 375 aa7□□□□□ -1.29
UBR3-209ENST00000477461 SHOXO15266 292 aa7□□□□□ -1.29
UBR3-209ENST00000477461 ZNF205O95201 554 aa7□□□□□ -1.29
UBR3-209ENST00000477461 PI3P19957 117 aa7□□□□□ -1.29
UBR3-209ENST00000477461 CEBPAP49715 358 aaPredicted RBP7□□□□□ -1.29
UBR3-209ENST00000477461 RACK1P63244 317 aaKnown RBP7□□□□□ -1.29
UBR3-209ENST00000477461 CYP4F8P98187 520 aa7□□□□□ -1.29
UBR3-209ENST00000477461 RAB3GAP1Q15042 981 aa7□□□□□ -1.29
UBR3-209ENST00000477461 VMACQ2NL98 169 aa7□□□□□ -1.29
UBR3-209ENST00000477461 ZNF385BQ569K4 471 aa7□□□□□ -1.29
UBR3-209ENST00000477461 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
UBR3-209ENST00000477461 PPFIBP1Q86W92 1011 aa7□□□□□ -1.29
UBR3-209ENST00000477461 JMJD8Q96S16 334 aa7□□□□□ -1.29
UBR3-209ENST00000477461 IRAK3Q9Y616 596 aa7□□□□□ -1.29
UBR3-209ENST00000477461 H0Y8X5 98 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 MPOP05164 745 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms