RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 TMEM201Q5SNT2 666 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 ALG1LQ6GMV1 187 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 DAGLBQ8NCG7 672 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 FNIP1Q8TF40 1166 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 ASCC2Q9H1I8 757 aaPredicted RBP5.42□□□□□ -1.54
XRN1-211ENST00000477237 TNFRSF12AQ9NP84 129 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 SPG7Q9UQ90 795 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 ZNF20P17024 532 aa5.41□□□□□ -1.54
XRN1-211ENST00000477237 PRKCAP17252 672 aa5.41□□□□□ -1.54
XRN1-211ENST00000477237 LIG3P49916 1009 aa5.41□□□□□ -1.54
XRN1-211ENST00000477237 PCBP3P57721 371 aaKnown RBP5.41□□□□□ -1.54
XRN1-211ENST00000477237 ZNF200P98182 395 aaPredicted RBP5.41□□□□□ -1.54
XRN1-211ENST00000477237 LAPTM5Q13571 262 aa5.41□□□□□ -1.54
XRN1-211ENST00000477237 LINC00116Q8NCU8 138 aa5.41□□□□□ -1.54
XRN1-211ENST00000477237 JARID2Q92833 1246 aaPredicted RBP5.41□□□□□ -1.54
XRN1-211ENST00000477237 MRIQ9BWK5 157 aa5.41□□□□□ -1.54
XRN1-211ENST00000477237 TNFRSF10DQ9UBN6 386 aa5.41□□□□□ -1.54
XRN1-211ENST00000477237 GPR55Q9Y2T6 319 aaPredicted RBP5.41□□□□□ -1.54
XRN1-211ENST00000477237 TAF6LQ9Y6J9 622 aa5.41□□□□□ -1.54
XRN1-211ENST00000477237 SSU72P8A0A1W2PR75 194 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 WTIPA6NIX2 430 aaPredicted RBP5.4□□□□□ -1.54
XRN1-211ENST00000477237 CHURC1-FNTBB4DL54 471 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 SYPP08247 313 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 MSL3P1P0C860 447 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 C6P13671 934 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 PFKLP17858 780 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 MAPK1P28482 360 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 CYP4F8P98187 520 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 FMR1Q06787 632 aaKnown RBP eCLIP5.4□□□□□ -1.54
XRN1-211ENST00000477237 PLEKHN1Q494U1 663 aaPredicted RBP5.4□□□□□ -1.54
XRN1-211ENST00000477237 ZNF526Q8TF50 670 aaPredicted RBP5.4□□□□□ -1.54
XRN1-211ENST00000477237 CCDC74BQ96LY2 380 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 C1QTNF3Q9BXJ4 246 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 PRDM14Q9GZV8 571 aa5.4□□□□□ -1.54
XRN1-211ENST00000477237 NOBOXO60393 691 aa5.39□□□□□ -1.55
XRN1-211ENST00000477237 FBLN1P23142 703 aa5.39□□□□□ -1.55
XRN1-211ENST00000477237 CEBPAP49715 358 aaPredicted RBP5.39□□□□□ -1.55
XRN1-211ENST00000477237 TMC3Q7Z5M5 1100 aa5.39□□□□□ -1.55
XRN1-211ENST00000477237 SAPCD2Q86UD0 394 aa5.39□□□□□ -1.55
XRN1-211ENST00000477237 SLCO6A1Q86UG4 719 aa5.39□□□□□ -1.55
XRN1-211ENST00000477237 Q8N1X5 172 aa5.39□□□□□ -1.55
XRN1-211ENST00000477237 ZNF655Q8N720 491 aaPredicted RBP5.39□□□□□ -1.55
XRN1-211ENST00000477237 FCRL2Q96LA5 508 aaPredicted RBP5.39□□□□□ -1.55
XRN1-211ENST00000477237 C8orf49Q96NF6 230 aa5.39□□□□□ -1.55
XRN1-211ENST00000477237 BIN2Q9UBW5 565 aaPredicted RBP5.39□□□□□ -1.55
XRN1-211ENST00000477237 PLA2G2DQ9UNK4 145 aa5.39□□□□□ -1.55
XRN1-211ENST00000477237 SH3D21A4FU49 640 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 GDF5P43026 501 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 MAPKAPK2P49137 400 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 HTRA3P83110 453 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 FOXO4P98177 505 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 DLX2Q07687 328 aaPredicted RBP5.38□□□□□ -1.55
XRN1-211ENST00000477237 ZC3H14Q6PJT7 736 aaKnown RBP5.38□□□□□ -1.55
XRN1-211ENST00000477237 ZFPM1Q8IX07 1006 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 NUP43Q8NFH3 380 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 KIF2CQ99661 725 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 LNPKQ9C0E8 428 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 KLHL3Q9UH77 587 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 ACSL6Q9UKU0 697 aa5.38□□□□□ -1.55
XRN1-211ENST00000477237 ATF2P15336 505 aa5.37□□□□□ -1.55
XRN1-211ENST00000477237 TACR2P21452 398 aa5.37□□□□□ -1.55
XRN1-211ENST00000477237 SNW1Q13573 536 aaKnown RBP5.37□□□□□ -1.55
XRN1-211ENST00000477237 SLITRK6Q9H5Y7 841 aa5.37□□□□□ -1.55
XRN1-211ENST00000477237 REV1Q9UBZ9 1251 aa5.37□□□□□ -1.55
XRN1-211ENST00000477237 TLR6Q9Y2C9 796 aa5.37□□□□□ -1.55
XRN1-211ENST00000477237 PMF1-BGLAPU3KQ54 211 aa5.37□□□□□ -1.55
XRN1-211ENST00000477237 DNAJA2O60884 412 aa5.36□□□□□ -1.55
XRN1-211ENST00000477237 ACVRL1P37023 503 aa5.36□□□□□ -1.55
XRN1-211ENST00000477237 TARBP2Q15633 366 aaKnown RBP5.36□□□□□ -1.55
XRN1-211ENST00000477237 CRB2Q5IJ48 1285 aa5.36□□□□□ -1.55
XRN1-211ENST00000477237 LOXL4Q96JB6 756 aa5.36□□□□□ -1.55
XRN1-211ENST00000477237 ERVK13-1Q9NX77 482 aa5.36□□□□□ -1.55
XRN1-211ENST00000477237 HCFC2Q9Y5Z7 792 aa5.36□□□□□ -1.55
XRN1-211ENST00000477237 PRAMEF1O95521 474 aa5.35□□□□□ -1.55
XRN1-211ENST00000477237 PHACTR4Q8IZ21 702 aa5.35□□□□□ -1.55
XRN1-211ENST00000477237 TTC9BQ8N6N2 239 aa5.35□□□□□ -1.55
XRN1-211ENST00000477237 SAMD11Q96NU1 681 aa5.35□□□□□ -1.55
XRN1-211ENST00000477237 IMPACTQ9P2X3 320 aa5.35□□□□□ -1.55
XRN1-211ENST00000477237 MINPP1Q9UNW1 487 aa5.35□□□□□ -1.55
XRN1-211ENST00000477237 PRR36Q9H6K5 1346 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 A0A1W2PQ45 241 aaPredicted RBP5.34□□□□□ -1.55
XRN1-211ENST00000477237 A0A1W2PQY0 241 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 CYR61O00622 381 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 GBP1P32455 592 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 GJA9P57773 515 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 ATP2B2Q01814 1243 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 NR1I3Q14994 352 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 NBPF9Q3BBW0 867 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 BNC2Q6ZN30 1099 aaPredicted RBP5.34□□□□□ -1.55
XRN1-211ENST00000477237 SPRED1Q7Z699 444 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 CARFQ8N187 725 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 JMJD8Q96S16 334 aa5.34□□□□□ -1.55
XRN1-211ENST00000477237 EAF1Q96JC9 268 aaPredicted RBP5.33□□□□□ -1.56
XRN1-211ENST00000477237 C1orf115Q9H7X2 142 aa5.33□□□□□ -1.56
XRN1-211ENST00000477237 FAM221AA4D161 298 aa5.32□□□□□ -1.56
XRN1-211ENST00000477237 RGS13O14921 159 aa5.32□□□□□ -1.56
XRN1-211ENST00000477237 UBOX5O94941 541 aa5.32□□□□□ -1.56
XRN1-211ENST00000477237 EIF4BP23588 611 aaKnown RBP5.32□□□□□ -1.56
XRN1-211ENST00000477237 CHMP4BP1P59074 171 aa5.32□□□□□ -1.56
XRN1-211ENST00000477237 RNF4P78317 190 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms