RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 YEATS4O95619 227 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 SLC39A14Q15043 492 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 COA7Q96BR5 231 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 PCDHB6Q9Y5E3 794 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 PNMA6FA0A0J9YX94 578 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 BMP3P12645 472 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 ZSCAN23Q3MJ62 389 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 RASGRP4Q8TDF6 673 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 ZMYND12Q9H0C1 365 aa16.61■□□□□ 0.25
COL4A6-206ENST00000477085 SEC63Q9UGP8 760 aaKnown RBP16.61■□□□□ 0.25
COL4A6-206ENST00000477085 PITPNM2Q9BZ72 1349 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 GLTPD2A6NH11 291 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 POTECB2RU33 542 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 SPTLC2O15270 562 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 SNAP25P60880 206 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 STK38Q15208 465 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 ZYXQ15942 572 aaKnown RBP16.6■□□□□ 0.25
COL4A6-206ENST00000477085 DAGLBQ8NCG7 672 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 ZKSCAN4Q969J2 545 aaPredicted RBP16.6■□□□□ 0.25
COL4A6-206ENST00000477085 VCPKMTQ9H867 229 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 PCDHA6Q9UN73 950 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 PCDHA8Q9Y5H6 950 aa16.6■□□□□ 0.25
COL4A6-206ENST00000477085 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 ADM5C9JUS6 153 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 ZBTB5O15062 677 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 CALML3P27482 149 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 NAPAP54920 295 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 RILPL1Q5EBL4 403 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
COL4A6-206ENST00000477085 BTNL9Q6UXG8 535 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 ZNF341Q9BYN7 854 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 GOLPH3LQ9H4A5 285 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 ISY1Q9ULR0 285 aaKnown RBP16.59■□□□□ 0.25
COL4A6-206ENST00000477085 PPP2R3BQ9Y5P8 575 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 SMCO2A6NFE2 343 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 ATP2B1P20020 1258 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 MARCKSP29966 332 aaPredicted RBP16.59■□□□□ 0.25
COL4A6-206ENST00000477085 ME1P48163 572 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 DGKZQ13574 1117 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 FAM83BQ5T0W9 1011 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 KCNG4Q8TDN1 519 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 KLRG1Q96E93 195 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 BRMS1Q9HCU9 246 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
COL4A6-206ENST00000477085 EPHX2P34913 555 aa16.58■□□□□ 0.24
COL4A6-206ENST00000477085 QRICH1Q2TAL8 776 aa16.58■□□□□ 0.24
COL4A6-206ENST00000477085 DCAF15Q66K64 600 aa16.58■□□□□ 0.24
COL4A6-206ENST00000477085 GALNT17Q6IS24 598 aa16.58■□□□□ 0.24
COL4A6-206ENST00000477085 GAS2L3Q86XJ1 694 aa16.58■□□□□ 0.24
COL4A6-206ENST00000477085 CCDC148Q8NFR7 591 aa16.58■□□□□ 0.24
COL4A6-206ENST00000477085 WRNIP1Q96S55 665 aa16.58■□□□□ 0.24
COL4A6-206ENST00000477085 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
COL4A6-206ENST00000477085 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.58■□□□□ 0.24
COL4A6-206ENST00000477085 GOLGA6L4A6NEF3 574 aa16.57■□□□□ 0.24
COL4A6-206ENST00000477085 NR1I2O75469 434 aa16.57■□□□□ 0.24
COL4A6-206ENST00000477085 USP2O75604 605 aaPredicted RBP16.57■□□□□ 0.24
COL4A6-206ENST00000477085 SYDE2Q5VT97 1194 aa16.57■□□□□ 0.24
COL4A6-206ENST00000477085 ADALQ6DHV7 355 aa16.57■□□□□ 0.24
COL4A6-206ENST00000477085 CCAR1Q8IX12 1150 aaKnown RBP16.57■□□□□ 0.24
COL4A6-206ENST00000477085 FAM177A1Q8N128 213 aaPredicted RBP16.57■□□□□ 0.24
COL4A6-206ENST00000477085 ATAD5Q96QE3 1844 aa16.57■□□□□ 0.24
COL4A6-206ENST00000477085 POLR2AP24928 1970 aaKnown RBP16.57■□□□□ 0.24
COL4A6-206ENST00000477085 ESYT2A0FGR8 921 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 PPP6R2O75170 966 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 CDC37Q16543 378 aaPredicted RBP16.56■□□□□ 0.24
COL4A6-206ENST00000477085 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
COL4A6-206ENST00000477085 SCYL3Q8IZE3 742 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 DCPSQ96C86 337 aaKnown RBP16.56■□□□□ 0.24
COL4A6-206ENST00000477085 GINM1Q9NU53 330 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
COL4A6-206ENST00000477085 hCG_1984214I3L0E3 225 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 TAL1P17542 331 aaPredicted RBP16.56■□□□□ 0.24
COL4A6-206ENST00000477085 PTPRAP18433 802 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 GRIN1Q05586 938 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
COL4A6-206ENST00000477085 PRKG1Q13976 671 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 ZNF713Q8N859 430 aaPredicted RBP16.56■□□□□ 0.24
COL4A6-206ENST00000477085 ENGASEQ8NFI3 743 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 CLIC6Q96NY7 704 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 KIAA1683Q9H0B3 1180 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 TMEM260Q9NX78 707 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 DACT1Q9NYF0 836 aa16.56■□□□□ 0.24
COL4A6-206ENST00000477085 A0A1W2PQ27 194 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 A0A1W2PQ64 194 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 A0A1W2PQD8 194 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 SYCE3A1L190 88 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 ZNF445P59923 1031 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 ZNF174Q15697 407 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL4A6-206ENST00000477085 CCDC12Q8WUD4 166 aaPredicted RBP16.55■□□□□ 0.24
COL4A6-206ENST00000477085 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 TAF1DQ9H5J8 278 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms