RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 KCTD2Q14681 263 aa25.31■■□□□ 1.64
LIMK1-204ENST00000476792 TRPV1Q8NER1 839 aa25.31■■□□□ 1.64
LIMK1-204ENST00000476792 FEM1BQ9UK73 627 aa25.31■■□□□ 1.64
LIMK1-204ENST00000476792 SYNPO2Q9UMS6 1093 aa25.31■■□□□ 1.64
LIMK1-204ENST00000476792 NR2E3Q9Y5X4 410 aa25.31■■□□□ 1.64
LIMK1-204ENST00000476792 ORC4O43929 436 aa25.3■■□□□ 1.64
LIMK1-204ENST00000476792 MCCP23508 829 aa25.3■■□□□ 1.64
LIMK1-204ENST00000476792 MFAP1P55081 439 aaKnown RBP25.3■■□□□ 1.64
LIMK1-204ENST00000476792 OLFML2BQ68BL8 750 aa25.3■■□□□ 1.64
LIMK1-204ENST00000476792 TEX13BQ9BXU2 312 aa25.3■■□□□ 1.64
LIMK1-204ENST00000476792 C11orf49Q9H6J7 331 aa25.3■■□□□ 1.64
LIMK1-204ENST00000476792 RAVER2Q9HCJ3 691 aaKnown RBP25.3■■□□□ 1.64
LIMK1-204ENST00000476792 ZNFX1Q9P2E3 1918 aaKnown RBP25.29■■□□□ 1.64
LIMK1-204ENST00000476792 ZNF236Q9UL36 1845 aa25.29■■□□□ 1.64
LIMK1-204ENST00000476792 TMEM232C9JQI7 657 aa25.29■■□□□ 1.64
LIMK1-204ENST00000476792 PDE4AP27815 886 aa25.29■■□□□ 1.64
LIMK1-204ENST00000476792 SLC1A4P43007 532 aa25.29■■□□□ 1.64
LIMK1-204ENST00000476792 IKQ13123 557 aaPredicted RBP25.29■■□□□ 1.64
LIMK1-204ENST00000476792 PPP4R3BQ5MIZ7 849 aa25.29■■□□□ 1.64
LIMK1-204ENST00000476792 PRAMEF19Q5SWL8 479 aa25.29■■□□□ 1.64
LIMK1-204ENST00000476792 DDX20Q9UHI6 824 aaKnown RBP25.29■■□□□ 1.64
LIMK1-204ENST00000476792 COLQQ9Y215 455 aaPredicted RBP25.29■■□□□ 1.64
LIMK1-204ENST00000476792 RIPK3Q9Y572 518 aa25.29■■□□□ 1.64
LIMK1-204ENST00000476792 COPB2P35606 906 aa25.28■■□□□ 1.64
LIMK1-204ENST00000476792 MAML3Q96JK9 1138 aa25.28■■□□□ 1.64
LIMK1-204ENST00000476792 IGHA2P01877 340 aa25.27■■□□□ 1.64
LIMK1-204ENST00000476792 FGRP09769 529 aa25.27■■□□□ 1.64
LIMK1-204ENST00000476792 CYBAP13498 195 aa25.27■■□□□ 1.64
LIMK1-204ENST00000476792 HABP4Q5JVS0 413 aaKnown RBP25.27■■□□□ 1.64
LIMK1-204ENST00000476792 ANO1Q5XXA6 986 aa25.27■■□□□ 1.64
LIMK1-204ENST00000476792 KCTD1Q719H9 257 aa25.27■■□□□ 1.64
LIMK1-204ENST00000476792 RASGRP2Q7LDG7 609 aa25.27■■□□□ 1.64
LIMK1-204ENST00000476792 SLC38A10Q9HBR0 1119 aa25.27■■□□□ 1.64
LIMK1-204ENST00000476792 HIP1O00291 1037 aa25.26■■□□□ 1.63
LIMK1-204ENST00000476792 CHRDL2Q6WN34 429 aa25.26■■□□□ 1.63
LIMK1-204ENST00000476792 MFSD6Q6ZSS7 791 aa25.26■■□□□ 1.63
LIMK1-204ENST00000476792 GMCL1Q96IK5 515 aa25.26■■□□□ 1.63
LIMK1-204ENST00000476792 ZMYM6O95789 1325 aa25.26■■□□□ 1.63
LIMK1-204ENST00000476792 STAT2P52630 851 aa25.25■■□□□ 1.63
LIMK1-204ENST00000476792 TBC1D10CQ8IV04 446 aa25.25■■□□□ 1.63
LIMK1-204ENST00000476792 C7orf61Q8IZ16 206 aa25.25■■□□□ 1.63
LIMK1-204ENST00000476792 CHURC1Q8WUH1 139 aa25.25■■□□□ 1.63
LIMK1-204ENST00000476792 STAG1Q8WVM7 1258 aa25.25■■□□□ 1.63
LIMK1-204ENST00000476792 DDX11Q96FC9 970 aa25.25■■□□□ 1.63
LIMK1-204ENST00000476792 MSCO60682 206 aa25.24■■□□□ 1.63
LIMK1-204ENST00000476792 CCDC96Q2M329 555 aa25.24■■□□□ 1.63
LIMK1-204ENST00000476792 ZNF792Q3KQV3 632 aa25.24■■□□□ 1.63
LIMK1-204ENST00000476792 AKNAD1Q5T1N1 836 aa25.24■■□□□ 1.63
LIMK1-204ENST00000476792 RCSD1Q6JBY9 416 aa25.24■■□□□ 1.63
LIMK1-204ENST00000476792 HOMER2Q9NSB8 354 aa25.24■■□□□ 1.63
LIMK1-204ENST00000476792 PFASO15067 1338 aa25.23■■□□□ 1.63
LIMK1-204ENST00000476792 ATP2A1O14983 1001 aa25.23■■□□□ 1.63
LIMK1-204ENST00000476792 MYCNP04198 464 aaPredicted RBP25.23■■□□□ 1.63
LIMK1-204ENST00000476792 SNAP25P60880 206 aa25.23■■□□□ 1.63
LIMK1-204ENST00000476792 TTC22Q5TAA0 569 aa25.23■■□□□ 1.63
LIMK1-204ENST00000476792 FAM160B2Q86V87 743 aa25.23■■□□□ 1.63
LIMK1-204ENST00000476792 ALPK3Q96L96 1907 aa25.22■■□□□ 1.63
LIMK1-204ENST00000476792 ZNF213O14771 459 aa25.22■■□□□ 1.63
LIMK1-204ENST00000476792 SLC34A2O95436 690 aa25.22■■□□□ 1.63
LIMK1-204ENST00000476792 GSPT1P15170 499 aaKnown RBP25.22■■□□□ 1.63
LIMK1-204ENST00000476792 TMEM47Q9BQJ4 181 aa25.22■■□□□ 1.63
LIMK1-204ENST00000476792 TINF2Q9BSI4 451 aa25.22■■□□□ 1.63
LIMK1-204ENST00000476792 SEPT4O43236 478 aa25.21■■□□□ 1.63
LIMK1-204ENST00000476792 TOP1P11387 765 aaKnown RBP25.21■■□□□ 1.63
LIMK1-204ENST00000476792 CCDC174Q6PII3 467 aa25.21■■□□□ 1.63
LIMK1-204ENST00000476792 ANKRD35Q8N283 1001 aa25.21■■□□□ 1.63
LIMK1-204ENST00000476792 RNF41Q9H4P4 317 aaPredicted RBP25.21■■□□□ 1.63
LIMK1-204ENST00000476792 ZMYND8Q9ULU4 1186 aaPredicted RBP25.21■■□□□ 1.63
LIMK1-204ENST00000476792 DIS3Q9Y2L1 958 aaKnown RBP25.21■■□□□ 1.63
LIMK1-204ENST00000476792 FRMPD3Q5JV73 1810 aa25.21■■□□□ 1.63
LIMK1-204ENST00000476792 NEDD4P46934 1319 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 PLXNA1Q9UIW2 1896 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 COL6A1P12109 1028 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 NOVP48745 357 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 OAZ1P54368 228 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 GJC2Q5T442 439 aaPredicted RBP25.2■■□□□ 1.62
LIMK1-204ENST00000476792 AGBL1Q96MI9 1066 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 ZKSCAN3Q9BRR0 538 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 SENP6Q9GZR1 1112 aaPredicted RBP25.2■■□□□ 1.62
LIMK1-204ENST00000476792 TCP11L1Q9NUJ3 509 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 PRR12Q9ULL5 1215 aa25.2■■□□□ 1.62
LIMK1-204ENST00000476792 FRMPD2Q68DX3 1309 aaPredicted RBP25.19■■□□□ 1.62
LIMK1-204ENST00000476792 FDX1P10109 184 aa25.19■■□□□ 1.62
LIMK1-204ENST00000476792 PCP11498 1178 aaKnown RBP25.19■■□□□ 1.62
LIMK1-204ENST00000476792 TAL1P17542 331 aaPredicted RBP25.19■■□□□ 1.62
LIMK1-204ENST00000476792 TTBK2Q6IQ55 1244 aa25.19■■□□□ 1.62
LIMK1-204ENST00000476792 CHST13Q8NET6 341 aa25.19■■□□□ 1.62
LIMK1-204ENST00000476792 DCAF4Q8WV16 495 aa25.19■■□□□ 1.62
LIMK1-204ENST00000476792 IL25Q9H293 177 aa25.19■■□□□ 1.62
LIMK1-204ENST00000476792 GPCPD1Q9NPB8 672 aa25.19■■□□□ 1.62
LIMK1-204ENST00000476792 SLC16A2P36021 539 aa25.18■■□□□ 1.62
LIMK1-204ENST00000476792 ESR2Q92731 530 aa25.18■■□□□ 1.62
LIMK1-204ENST00000476792 DSCC1Q9BVC3 393 aa25.18■■□□□ 1.62
LIMK1-204ENST00000476792 RBM27Q9P2N5 1060 aaKnown RBP25.18■■□□□ 1.62
LIMK1-204ENST00000476792 FBXO40Q9UH90 709 aa25.18■■□□□ 1.62
LIMK1-204ENST00000476792 ZNF536O15090 1300 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 SMCHD1A6NHR9 2005 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 PLA2G6O60733 806 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 ALAS1P13196 640 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 SYN1P17600 705 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms