RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 NOL9Q5SY16 702 aaKnown RBP5.11□□□□□ -1.59
NPHP3-207ENST00000476742 TDRD10Q5VZ19 366 aaKnown RBP5.11□□□□□ -1.59
NPHP3-207ENST00000476742 TMC3Q7Z5M5 1100 aa5.11□□□□□ -1.59
NPHP3-207ENST00000476742 C8orf37Q96NL8 207 aa5.11□□□□□ -1.59
NPHP3-207ENST00000476742 GMLQ99445 158 aa5.11□□□□□ -1.59
NPHP3-207ENST00000476742 RC3H2Q9HBD1 1191 aaKnown RBP5.11□□□□□ -1.59
NPHP3-207ENST00000476742 CHST7Q9NS84 486 aa5.11□□□□□ -1.59
NPHP3-207ENST00000476742 PRKAG3Q9UGI9 489 aa5.11□□□□□ -1.59
NPHP3-207ENST00000476742 LTBP3Q9NS15 1303 aa5.11□□□□□ -1.59
NPHP3-207ENST00000476742 SHISA3A0PJX4 238 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 WASH4PA8MWX3 477 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 RBAK-RBAKDNI3L0D1 243 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 SMAD7O15105 426 aaKnown RBP5.1□□□□□ -1.59
NPHP3-207ENST00000476742 PRAMEF1O95521 474 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 RNASE1P07998 156 aaKnown RBP5.1□□□□□ -1.59
NPHP3-207ENST00000476742 SNW1Q13573 536 aaKnown RBP5.1□□□□□ -1.59
NPHP3-207ENST00000476742 VHLLQ6RSH7 139 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 MCF2L2Q86YR7 1114 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 FAM169BQ8N8A8 192 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 RELTQ969Z4 430 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 ALPK1Q96QP1 1244 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 DSCC1Q9BVC3 393 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 HDAC8Q9BY41 377 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 PRDM7Q9NQW5 492 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 MBNL3Q9NUK0 354 aaKnown RBP5.1□□□□□ -1.59
NPHP3-207ENST00000476742 FAM86C1Q9NVL1 165 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 GFOD1Q9NXC2 390 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 ACTR10Q9NZ32 417 aa5.1□□□□□ -1.59
NPHP3-207ENST00000476742 ITGA4P13612 1032 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 ETFBP38117 255 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 PCBP3P57721 371 aaKnown RBP5.09□□□□□ -1.59
NPHP3-207ENST00000476742 KRTAP10-2P60368 255 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 AXDND1Q5T1B0 1012 aaPredicted RBP5.09□□□□□ -1.59
NPHP3-207ENST00000476742 DCAF15Q66K64 600 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 RNF111Q6ZNA4 994 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 PPFIBP1Q86W92 1011 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 DHX38Q92620 1227 aaKnown RBP5.09□□□□□ -1.59
NPHP3-207ENST00000476742 TCTN2Q96GX1 697 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 GBP3Q9H0R5 595 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 SLAMF8Q9P0V8 285 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 ADAMTS6Q9UKP5 1117 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 PCDHA11Q9Y5I1 949 aa5.09□□□□□ -1.59
NPHP3-207ENST00000476742 OVOL3O00110 214 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 MEIS1O00470 390 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 NAT2P11245 290 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 CD247P20963 164 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 ENDOUP21128 410 aaKnown RBP5.08□□□□□ -1.6
NPHP3-207ENST00000476742 NCAPHQ15003 741 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 LARP1BQ659C4 914 aaKnown RBP5.08□□□□□ -1.6
NPHP3-207ENST00000476742 CWF19L1Q69YN2 538 aaKnown RBP5.08□□□□□ -1.6
NPHP3-207ENST00000476742 HEATR6Q6AI08 1181 aaKnown RBP5.08□□□□□ -1.6
NPHP3-207ENST00000476742 KIAA1211LQ6NV74 962 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 ATG4DQ86TL0 474 aaPredicted RBP5.08□□□□□ -1.6
NPHP3-207ENST00000476742 AMIGO3Q86WK7 504 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 LRRN4CLQ8ND94 238 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 C20orf173Q96LM9 149 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 HAUS7Q99871 368 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 TANGO6Q9C0B7 1094 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 ZNF408Q9H9D4 720 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 GP6Q9HCN6 339 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 FAM53CQ9NYF3 392 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 WHRNQ9P202 907 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 PPP1R1BQ9UD71 204 aaPredicted RBP5.08□□□□□ -1.6
NPHP3-207ENST00000476742 TMEM59LQ9UK28 342 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 TCFL5Q9UL49 500 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 PCDHB10Q9UN67 800 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 ZNF451Q9Y4E5 1061 aa5.08□□□□□ -1.6
NPHP3-207ENST00000476742 A0A087WZG4 1122 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 SHOXO15266 292 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 PPM1BO75688 479 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 STK10O94804 968 aaKnown RBP5.07□□□□□ -1.6
NPHP3-207ENST00000476742 TSPAN15O95858 294 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 GSNP06396 782 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 SYPP08247 313 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 RAC2P15153 192 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 ATP2B1P20020 1258 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 GDNFP39905 211 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 AFMP43652 599 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 DUSP4Q13115 394 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 FXNQ16595 210 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 ADAT2Q7Z6V5 191 aaKnown RBP5.07□□□□□ -1.6
NPHP3-207ENST00000476742 USHBP1Q8N6Y0 703 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 LINC00116Q8NCU8 138 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 SF3B6Q9Y3B4 125 aaKnown RBP5.07□□□□□ -1.6
NPHP3-207ENST00000476742 FHOD1Q9Y613 1164 aa5.07□□□□□ -1.6
NPHP3-207ENST00000476742 DNAJC25-GNG10A0A024R161 153 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 ANKRD34BA5PLL1 514 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 RPL10P27635 214 aaKnown RBP5.06□□□□□ -1.6
NPHP3-207ENST00000476742 BMP8BP34820 402 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 NOP2P46087 812 aaKnown RBP5.06□□□□□ -1.6
NPHP3-207ENST00000476742 ZNF143P52747 638 aaPredicted RBP5.06□□□□□ -1.6
NPHP3-207ENST00000476742 ZNF445P59923 1031 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 TEKQ02763 1124 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 SF3A1Q15459 793 aaKnown RBP5.06□□□□□ -1.6
NPHP3-207ENST00000476742 ANKS3Q6ZW76 656 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 WAPLQ7Z5K2 1190 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 SPPL2CQ8IUH8 684 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 OXR1Q8N573 874 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 FLAD1Q8NFF5 587 aa5.06□□□□□ -1.6
NPHP3-207ENST00000476742 KLHL6Q8WZ60 621 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms