RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 NELFBQ8WX92 580 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 GOLGA1Q92805 767 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 MAN1B1Q9UKM7 699 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 GLI3P10071 1580 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 ABL1P00519 1130 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 PNMA6AP0CW24 399 aaPredicted RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 VEGFAP15692 232 aaPredicted RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 PRDX5P30044 214 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 KRT2P35908 639 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 SLC16A2P36021 539 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 RPS8P62241 208 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 FOXO4P98177 505 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 PDE4DQ08499 809 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 TTC38Q5R3I4 469 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC43Q96MW1 224 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 MRPL44Q9H9J2 332 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 PACSIN2Q9UNF0 486 aaPredicted RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 USP42Q9H9J4 1324 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 PHRF1Q9P1Y6 1649 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC196A0A1B0GTZ2 297 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 DDX39AO00148 427 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 ZNF185O15231 689 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 NEMFO60524 1076 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 EIF3JO75822 258 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 USH1GQ495M9 461 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 PHLDB2Q86SQ0 1253 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 FCHSD1Q86WN1 690 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 ZBTB38Q8NAP3 1195 aaPredicted RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 FANCBQ8NB91 859 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CEP89Q96ST8 783 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 SH2D3AQ9BRG2 576 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 GOLPH3Q9H4A6 298 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 UNC80Q8N2C7 3258 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 NTSR2O95665 410 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 ZNF76P36508 570 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 KLK7P49862 253 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 C2orf54Q08AI8 447 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CUL4BQ13620 913 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 ZSCAN26Q16670 478 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 MAP9Q49MG5 647 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 SLC30A10Q6XR72 485 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 SND1Q7KZF4 910 aaKnown RBP eCLIP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 METTL16Q86W50 562 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CSGALNACT2Q8N6G5 542 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC148Q8NFR7 591 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 WASF1Q92558 559 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC42Q96M95 316 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 LBHD1Q9BQE6 289 aaPredicted RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 DSCC1Q9BVC3 393 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 VEZTQ9HBM0 779 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 SEC63Q9UGP8 760 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 TCEAL9Q9UHQ7 104 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 LUC7L2Q9Y383 392 aaKnown RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 AOX1Q06278 1338 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 FRMD3A2A2Y4 597 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CALM1P0DP23 149 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CALM2P0DP24 149 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CALM3P0DP25 149 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 LIG3P49916 1009 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 SLC39A14Q15043 492 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 BRAPQ7Z569 592 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 MRFAP1L1Q96HT8 127 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 CHP1Q99653 195 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 FUCA2Q9BTY2 467 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 TEX13AQ9BXU3 409 aaPredicted RBP5.6□□□□□ -1.51
CCDC39-204ENST00000476379 EXOC1Q9NV70 894 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 HYOU1Q9Y4L1 999 aa5.6□□□□□ -1.51
CCDC39-204ENST00000476379 ATRNO75882 1429 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CCP110O43303 1012 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 TAL1P17542 331 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CYP4A11Q02928 519 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC152Q4G0S7 254 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 EAPPQ56P03 285 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-204ENST00000476379 USP17L2Q6R6M4 530 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC25Q86WR0 208 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CTNNBL1Q8WYA6 563 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-204ENST00000476379 NOC4LQ9BVI4 516 aaKnown RBP5.59□□□□□ -1.51
CCDC39-204ENST00000476379 GTPBP4Q9BZE4 634 aaKnown RBP5.59□□□□□ -1.51
CCDC39-204ENST00000476379 TMX4Q9H1E5 349 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CEP131Q9UPN4 1083 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 H0YIN7 160 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 PPIP5K2O43314 1243 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 NCK2O43639 380 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 PDE8BO95263 885 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CMA1P23946 247 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 POLD1P28340 1107 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 MNAT1P51948 309 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 GPSM2P81274 684 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 TERF2Q15554 542 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 TICAM2Q86XR7 235 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CRACR2BQ8N4Y2 399 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-204ENST00000476379 ABCB6Q9NP58 842 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 TCP11L1Q9NUJ3 509 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 RTEL1Q9NZ71 1219 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 CALCOCO1Q9P1Z2 691 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 KIF1AQ12756 1690 aa5.59□□□□□ -1.51
CCDC39-204ENST00000476379 PDE8AO60658 829 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms