RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 IQUBQ8NA54 791 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 CEP95Q96GE4 821 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 GSDMAQ96QA5 445 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 LZTS2Q9BRK4 669 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 ATP6V0A2Q9Y487 856 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 PAXBP1Q9Y5B6 917 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 TOP1P11387 765 aaKnown RBP18.12■□□□□ 0.49
VARS2-207ENST00000476162 ARL6IP4Q66PJ3 421 aaKnown RBP18.12■□□□□ 0.49
VARS2-207ENST00000476162 USP17L2Q6R6M4 530 aa18.12■□□□□ 0.49
VARS2-207ENST00000476162 CCDC148Q8NFR7 591 aa18.12■□□□□ 0.49
VARS2-207ENST00000476162 DDX60LQ5H9U9 1706 aaKnown RBP18.12■□□□□ 0.49
VARS2-207ENST00000476162 F8W031 263 aaPredicted RBP18.11■□□□□ 0.49
VARS2-207ENST00000476162 CD44P16070 742 aaKnown RBP18.11■□□□□ 0.49
VARS2-207ENST00000476162 CAPN2P17655 700 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 KLHL10Q6JEL2 608 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 COA1Q9GZY4 146 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 NRDCO43847 1150 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 PARP1P09874 1014 aaKnown RBP18.11■□□□□ 0.49
VARS2-207ENST00000476162 CDC25AP30304 524 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 PICALMQ13492 652 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 GALNT17Q6IS24 598 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 SMYD4Q8IYR2 804 aaPredicted RBP18.11■□□□□ 0.49
VARS2-207ENST00000476162 DAGLBQ8NCG7 672 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 SPZ1Q9BXG8 430 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 BLZF1Q9H2G9 400 aa18.11■□□□□ 0.49
VARS2-207ENST00000476162 SRGNP10124 158 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 GOLGA8FQ08AF8 430 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 GOLGA8DPQ0D2H9 430 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 INF2Q27J81 1249 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 PDXDC2PQ6P474 469 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 MTRQ99707 1265 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 ZC3H12CQ9C0D7 883 aaKnown RBP18.1■□□□□ 0.49
VARS2-207ENST00000476162 LTBP1Q14766 1721 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 LONP1P36776 959 aaKnown RBP18.1■□□□□ 0.49
VARS2-207ENST00000476162 STX17P56962 302 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 CUL4BQ13620 913 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 HOMER1Q86YM7 354 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 CERS5Q8N5B7 392 aa18.1■□□□□ 0.49
VARS2-207ENST00000476162 KCNJ6P48051 423 aa18.09■□□□□ 0.49
VARS2-207ENST00000476162 CT47A1Q5JQC4 288 aaPredicted RBP18.09■□□□□ 0.49
VARS2-207ENST00000476162 COL23A1Q86Y22 540 aaPredicted RBP18.09■□□□□ 0.49
VARS2-207ENST00000476162 NLGN1Q8N2Q7 840 aa18.09■□□□□ 0.49
VARS2-207ENST00000476162 PYM1Q9BRP8 204 aaKnown RBP18.09■□□□□ 0.49
VARS2-207ENST00000476162 MXD3Q9BW11 206 aa18.09■□□□□ 0.49
VARS2-207ENST00000476162 TMEM60Q9H2L4 133 aa18.09■□□□□ 0.49
VARS2-207ENST00000476162 CALCOCO1Q9P1Z2 691 aa18.09■□□□□ 0.49
VARS2-207ENST00000476162 BRWD3Q6RI45 1802 aa18.09■□□□□ 0.49
VARS2-207ENST00000476162 LRRC37AA6NMS7 1700 aa18.09■□□□□ 0.49
VARS2-207ENST00000476162 PPP1R3GB7ZBB8 358 aa18.08■□□□□ 0.49
VARS2-207ENST00000476162 SPATA1Q5VX52 437 aa18.08■□□□□ 0.49
VARS2-207ENST00000476162 CCDC112Q8NEF3 446 aa18.08■□□□□ 0.49
VARS2-207ENST00000476162 KIF18AQ8NI77 898 aa18.08■□□□□ 0.49
VARS2-207ENST00000476162 PPP1R13BQ96KQ4 1090 aa18.08■□□□□ 0.49
VARS2-207ENST00000476162 ZMYND12Q9H0C1 365 aa18.08■□□□□ 0.49
VARS2-207ENST00000476162 TMX1Q9H3N1 280 aa18.08■□□□□ 0.49
VARS2-207ENST00000476162 VAT1LQ9HCJ6 419 aa18.08■□□□□ 0.49
VARS2-207ENST00000476162 PSDA5PKW4 1024 aaPredicted RBP18.08■□□□□ 0.48
VARS2-207ENST00000476162 NOVP48745 357 aa18.08■□□□□ 0.48
VARS2-207ENST00000476162 NAPAP54920 295 aa18.08■□□□□ 0.48
VARS2-207ENST00000476162 MAPK8IP2Q13387 824 aaPredicted RBP18.08■□□□□ 0.48
VARS2-207ENST00000476162 DOK7Q18PE1 504 aa18.08■□□□□ 0.48
VARS2-207ENST00000476162 DTHD1Q6ZMT9 781 aa18.08■□□□□ 0.48
VARS2-207ENST00000476162 TTF2Q9UNY4 1162 aaKnown RBP18.08■□□□□ 0.48
VARS2-207ENST00000476162 MYH1P12882 1939 aa18.08■□□□□ 0.48
VARS2-207ENST00000476162 SYNRGQ9UMZ2 1314 aa18.08■□□□□ 0.48
VARS2-207ENST00000476162 USP17L5A8MUK1 530 aa18.07■□□□□ 0.48
VARS2-207ENST00000476162 NPR1P16066 1061 aa18.07■□□□□ 0.48
VARS2-207ENST00000476162 TBX2Q13207 712 aaPredicted RBP18.07■□□□□ 0.48
VARS2-207ENST00000476162 KARSQ15046 597 aaKnown RBP18.07■□□□□ 0.48
VARS2-207ENST00000476162 RRP36Q96EU6 259 aaKnown RBP18.07■□□□□ 0.48
VARS2-207ENST00000476162 DDX4Q9NQI0 724 aaKnown RBP18.07■□□□□ 0.48
VARS2-207ENST00000476162 SUGT1Q9Y2Z0 365 aa18.07■□□□□ 0.48
VARS2-207ENST00000476162 GTPBP6O43824 516 aaPredicted RBP18.07■□□□□ 0.48
VARS2-207ENST00000476162 TXLNAP40222 546 aa18.07■□□□□ 0.48
VARS2-207ENST00000476162 SPECC1LQ69YQ0 1117 aa18.07■□□□□ 0.48
VARS2-207ENST00000476162 UBA5Q9GZZ9 404 aa18.07■□□□□ 0.48
VARS2-207ENST00000476162 SMCO2A6NFE2 343 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 PP2D1A8MPX8 630 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 GABPAQ06546 454 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 NR1I3Q14994 352 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 DPP8Q6V1X1 898 aaPredicted RBP18.06■□□□□ 0.48
VARS2-207ENST00000476162 PIGSQ96S52 555 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 ANKRD31Q8N7Z5 1873 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 STAT6P42226 847 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 SCNN1DP51172 638 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 IRX3P78415 501 aaPredicted RBP18.06■□□□□ 0.48
VARS2-207ENST00000476162 APTXQ7Z2E3 356 aaKnown RBP18.06■□□□□ 0.48
VARS2-207ENST00000476162 FAM177A1Q8N128 213 aaPredicted RBP18.06■□□□□ 0.48
VARS2-207ENST00000476162 KRT222Q8N1A0 295 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 CCDC12Q8WUD4 166 aaPredicted RBP18.06■□□□□ 0.48
VARS2-207ENST00000476162 USP40Q9NVE5 1235 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 MTMR4Q9NYA4 1195 aa18.06■□□□□ 0.48
VARS2-207ENST00000476162 SEC63Q9UGP8 760 aaKnown RBP18.06■□□□□ 0.48
VARS2-207ENST00000476162 A0A1B0GTH6 734 aa18.05■□□□□ 0.48
VARS2-207ENST00000476162 PDHBP11177 359 aa18.05■□□□□ 0.48
VARS2-207ENST00000476162 SMARCA1P28370 1054 aa18.05■□□□□ 0.48
VARS2-207ENST00000476162 FAM193AP78312 1265 aa18.05■□□□□ 0.48
VARS2-207ENST00000476162 AEBP2Q6ZN18 517 aaPredicted RBP18.05■□□□□ 0.48
VARS2-207ENST00000476162 AKT1S1Q96B36 256 aa18.05■□□□□ 0.48
VARS2-207ENST00000476162 C6orf50Q9HD87 102 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms