RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 IQUBQ8NA54 791 aa18.88■□□□□ 0.61
TVP23B-202ENST00000476139 USP17L5A8MUK1 530 aa18.88■□□□□ 0.61
TVP23B-202ENST00000476139 PARP1P09874 1014 aaKnown RBP18.88■□□□□ 0.61
TVP23B-202ENST00000476139 PDXDC2PQ6P474 469 aa18.88■□□□□ 0.61
TVP23B-202ENST00000476139 CERS3Q8IU89 383 aa18.88■□□□□ 0.61
TVP23B-202ENST00000476139 SLF2Q8IX21 1173 aa18.88■□□□□ 0.61
TVP23B-202ENST00000476139 KCNQ5Q9NR82 932 aa18.88■□□□□ 0.61
TVP23B-202ENST00000476139 KARSQ15046 597 aaKnown RBP18.87■□□□□ 0.61
TVP23B-202ENST00000476139 GSDMAQ96QA5 445 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 TTF2Q9UNY4 1162 aaKnown RBP18.87■□□□□ 0.61
TVP23B-202ENST00000476139 SYT10Q6XYQ8 523 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 CCDC34Q96HJ3 373 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 PLIN2Q99541 437 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 NAV1Q8NEY1 1877 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 PPP1R3GB7ZBB8 358 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 ERCC5P28715 1186 aaPredicted RBP18.87■□□□□ 0.61
TVP23B-202ENST00000476139 NT5C2P49902 561 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 PPP1R13BQ96KQ4 1090 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 COA1Q9GZY4 146 aa18.87■□□□□ 0.61
TVP23B-202ENST00000476139 DDX60LQ5H9U9 1706 aaKnown RBP18.86■□□□□ 0.61
TVP23B-202ENST00000476139 FRMPD2Q68DX3 1309 aaPredicted RBP18.86■□□□□ 0.61
TVP23B-202ENST00000476139 ARL6IP4Q66PJ3 421 aaKnown RBP18.86■□□□□ 0.61
TVP23B-202ENST00000476139 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
TVP23B-202ENST00000476139 PIGSQ96S52 555 aa18.86■□□□□ 0.61
TVP23B-202ENST00000476139 NAPAP54920 295 aa18.86■□□□□ 0.61
TVP23B-202ENST00000476139 KIF18AQ8NI77 898 aa18.86■□□□□ 0.61
TVP23B-202ENST00000476139 LRRC47Q8N1G4 583 aaKnown RBP18.85■□□□□ 0.61
TVP23B-202ENST00000476139 CCDC148Q8NFR7 591 aa18.85■□□□□ 0.61
TVP23B-202ENST00000476139 CDK5RAP2Q96SN8 1893 aa18.85■□□□□ 0.61
TVP23B-202ENST00000476139 SMCO2A6NFE2 343 aa18.85■□□□□ 0.61
TVP23B-202ENST00000476139 MYO1BO43795 1136 aa18.85■□□□□ 0.61
TVP23B-202ENST00000476139 ADKP55263 362 aaKnown RBP18.85■□□□□ 0.61
TVP23B-202ENST00000476139 DPP8Q6V1X1 898 aaPredicted RBP18.85■□□□□ 0.61
TVP23B-202ENST00000476139 FAM177A1Q8N128 213 aaPredicted RBP18.85■□□□□ 0.61
TVP23B-202ENST00000476139 NLGN1Q8N2Q7 840 aa18.85■□□□□ 0.61
TVP23B-202ENST00000476139 SPZ1Q9BXG8 430 aa18.85■□□□□ 0.61
TVP23B-202ENST00000476139 ZMYND12Q9H0C1 365 aa18.85■□□□□ 0.61
TVP23B-202ENST00000476139 MAPK8IP1Q9UQF2 711 aa18.85■□□□□ 0.61
TVP23B-202ENST00000476139 TEX33O43247 280 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 MMP10P09238 476 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 AKR1B1P15121 316 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 DTHD1Q6ZMT9 781 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 LRRN4CLQ8ND94 238 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 TMX1Q9H3N1 280 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 KCND1Q9NSA2 647 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 USP40Q9NVE5 1235 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 APBA3O96018 575 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 LONP1P36776 959 aaKnown RBP18.84■□□□□ 0.61
TVP23B-202ENST00000476139 MTMR4Q9NYA4 1195 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 GABPAQ06546 454 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 NR1I3Q14994 352 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 SPATA1Q5VX52 437 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 DAGLBQ8NCG7 672 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 LZTS2Q9BRK4 669 aa18.84■□□□□ 0.61
TVP23B-202ENST00000476139 PDHBP11177 359 aa18.83■□□□□ 0.61
TVP23B-202ENST00000476139 ELF2Q15723 593 aa18.83■□□□□ 0.61
TVP23B-202ENST00000476139 LETM2Q2VYF4 491 aa18.83■□□□□ 0.61
TVP23B-202ENST00000476139 NAALADL2Q58DX5 795 aa18.83■□□□□ 0.61
TVP23B-202ENST00000476139 APTXQ7Z2E3 356 aaKnown RBP18.83■□□□□ 0.61
TVP23B-202ENST00000476139 RRP36Q96EU6 259 aaKnown RBP18.83■□□□□ 0.61
TVP23B-202ENST00000476139 DBNDD1Q9H9R9 158 aa18.83■□□□□ 0.61
TVP23B-202ENST00000476139 PCDHAC2Q9Y5I4 1007 aa18.83■□□□□ 0.61
TVP23B-202ENST00000476139 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.6
TVP23B-202ENST00000476139 NPR1P16066 1061 aa18.83■□□□□ 0.6
TVP23B-202ENST00000476139 TBX2Q13207 712 aaPredicted RBP18.83■□□□□ 0.6
TVP23B-202ENST00000476139 SPECC1LQ69YQ0 1117 aa18.83■□□□□ 0.6
TVP23B-202ENST00000476139 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
TVP23B-202ENST00000476139 AKT1S1Q96B36 256 aa18.83■□□□□ 0.6
TVP23B-202ENST00000476139 BIN2Q9UBW5 565 aaPredicted RBP18.83■□□□□ 0.6
TVP23B-202ENST00000476139 CCNT1O60563 726 aaKnown RBP18.82■□□□□ 0.6
TVP23B-202ENST00000476139 STAT6P42226 847 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 RRAGBQ5VZM2 374 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 LRRC15Q8TF66 581 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 ZNF622Q969S3 477 aaKnown RBP eCLIP18.82■□□□□ 0.6
TVP23B-202ENST00000476139 CTNND2Q9UQB3 1225 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 NOVP48745 357 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 NFIAQ12857 509 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 GALNT17Q6IS24 598 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 TMEM139Q8IV31 216 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 ZFPM1Q8IX07 1006 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 DISC1Q9NRI5 854 aa18.82■□□□□ 0.6
TVP23B-202ENST00000476139 SEC63Q9UGP8 760 aaKnown RBP18.82■□□□□ 0.6
TVP23B-202ENST00000476139 G3V3G9 751 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 DCAF8Q5TAQ9 597 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 JAKMIP3Q5VZ66 844 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 CDC42EP5Q6NZY7 148 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 TC2NQ8N9U0 490 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 RASSF8Q8NHQ8 419 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 COA7Q96BR5 231 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 TMEM260Q9NX78 707 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 ZNF219Q9P2Y4 722 aaPredicted RBP18.81■□□□□ 0.6
TVP23B-202ENST00000476139 GDAQ9Y2T3 454 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
TVP23B-202ENST00000476139 CACNB3P54284 484 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 APOBEC3HQ6NTF7 200 aaKnown RBP18.81■□□□□ 0.6
TVP23B-202ENST00000476139 GPCPD1Q9NPB8 672 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 LTBP1Q14766 1721 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 A0A1B0GTH6 734 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 GTPBP6O43824 516 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms