RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 HIP1RO75146 1068 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 PRR16Q569H4 304 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 SCYL2Q6P3W7 929 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 TRIML1Q8N9V2 468 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 PCDHA7Q9UN72 937 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 IFNL3Q8IZI9 196 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 GLG1Q92896 1179 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 MAP2K2P36507 400 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 YARSP54577 528 aaKnown RBP19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 KRT81Q14533 505 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 CLIC6Q96NY7 704 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 GBP5Q96PP8 586 aa19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 CDCA7Q9BWT1 371 aaPredicted RBP19.49■□□□□ 0.71
LPCAT1-202ENST00000475622 TBC1D22AQ8WUA7 517 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 PANK4Q9NVE7 773 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 ATF7P17544 494 aaPredicted RBP19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 MAP3K21Q5TCX8 1036 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 ZSWIM6Q9HCJ5 1215 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 EDC4Q6P2E9 1401 aaKnown RBP19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 PKP1Q13835 747 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 PDE1CQ14123 709 aaPredicted RBP19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 KSR1Q8IVT5 923 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 PSTPIP2Q9H939 334 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 ZMYM6O95789 1325 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 BTBD18B2RXH4 712 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 THAP12O43422 761 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 GTPBP6O43824 516 aaPredicted RBP19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 SPATA1Q5VX52 437 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 EAF2Q96CJ1 260 aaPredicted RBP19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 HAUS2Q9NVX0 235 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 RIPOR2Q9Y4F9 1068 aa19.48■□□□□ 0.71
LPCAT1-202ENST00000475622 H2AFZP0C0S5 128 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 OR52Z1P0C646 297 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 TRIM68Q6AZZ1 485 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 H2AFVQ71UI9 128 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 HINFPQ9BQA5 517 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 COL17A1Q9UMD9 1497 aaPredicted RBP19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 HSPD1P10809 573 aaKnown RBP19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 NDUFA8P51970 172 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 NXNQ6DKJ4 435 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 USP40Q9NVE5 1235 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 RBM6P78332 1123 aaKnown RBP19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 HADHQ16836 314 aaKnown RBP19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 SSH3Q8TE77 659 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 VCX3AQ9NNX9 186 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 SLC39A2Q9NP94 309 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 RABGAP1Q9Y3P9 1069 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 EPN1Q9Y6I3 576 aaPredicted RBP19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 ATP10BO94823 1461 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
LPCAT1-202ENST00000475622 TNKSO95271 1327 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 BAG2O95816 211 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 LIG3P49916 1009 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 ANKRD13CQ8N6S4 541 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 CHURC1Q8WUH1 139 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 USP44Q9H0E7 712 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 NEK8Q86SG6 692 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 GPT2Q8TD30 523 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 C1orf112Q9NSG2 853 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 FRMPD2Q68DX3 1309 aaPredicted RBP19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 TESPA1A2RU30 521 aaPredicted RBP19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 RPN1P04843 607 aaKnown RBP19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 TEKT1Q969V4 418 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 HOOK2Q96ED9 719 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 EFCC1Q9HA90 598 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 USH1CQ9Y6N9 552 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 NPC1L1Q9UHC9 1359 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 PNMA1Q8ND90 353 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 SDR42E1Q8WUS8 393 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 TRAPPC8Q9Y2L5 1435 aa19.46■□□□□ 0.71
LPCAT1-202ENST00000475622 H0YIN7 160 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 STAM2O75886 525 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 LIG4P49917 911 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 TRIM50Q86XT4 487 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 GPKOWQ92917 476 aaPredicted RBP eCLIP19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 K7ENM7 598 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 SCG2P13521 617 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 TCIRG1Q13488 830 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 RBBP5Q15291 538 aaKnown RBP19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 PDE6AP16499 860 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 PDE6CP51160 858 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 RPS8P62241 208 aaKnown RBP19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 IRX4P78413 519 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 ADAM9Q13443 819 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 DIXDC1Q155Q3 683 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 GOLGA5Q8TBA6 731 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 M0QZ92 97 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 MFSD14BQ5SR56 506 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 FAM178BQ8IXR5 827 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 TAB3Q8N5C8 712 aaPredicted RBP19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 MED4Q9NPJ6 270 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 KIF24Q5T7B8 1368 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 CTSWP56202 376 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 GTF2IP78347 998 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 DLGAP5Q15398 846 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 PPM1KQ8N3J5 372 aa19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 DDX27Q96GQ7 796 aaKnown RBP19.45■□□□□ 0.7
LPCAT1-202ENST00000475622 KLRF2D3W0D1 207 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms