RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 OLFML2BQ68BL8 750 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 LHX8Q68G74 356 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 NUP88Q99567 741 aaPredicted RBP18.43■□□□□ 0.54
CPSF3-203ENST00000475482 SLF1Q9BQI6 1058 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 HTATIP2Q9BUP3 242 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 INCENPQ9NQS7 918 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 ATP2A1O14983 1001 aa18.42■□□□□ 0.54
CPSF3-203ENST00000475482 CCND3P30281 292 aaPredicted RBP18.42■□□□□ 0.54
CPSF3-203ENST00000475482 STAT3P40763 770 aa18.42■□□□□ 0.54
CPSF3-203ENST00000475482 MFSD14CQ5VZR4 134 aa18.42■□□□□ 0.54
CPSF3-203ENST00000475482 IL17RBQ9NRM6 502 aa18.42■□□□□ 0.54
CPSF3-203ENST00000475482 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
CPSF3-203ENST00000475482 PLXNA1Q9UIW2 1896 aa18.41■□□□□ 0.54
CPSF3-203ENST00000475482 PLS1Q14651 629 aa18.41■□□□□ 0.54
CPSF3-203ENST00000475482 NCAPG2Q86XI2 1143 aa18.41■□□□□ 0.54
CPSF3-203ENST00000475482 PRPF38AQ8NAV1 312 aaKnown RBP18.41■□□□□ 0.54
CPSF3-203ENST00000475482 IL27Q8NEV9 243 aa18.41■□□□□ 0.54
CPSF3-203ENST00000475482 DIS3LQ8TF46 1054 aaKnown RBP18.41■□□□□ 0.54
CPSF3-203ENST00000475482 PAWRQ96IZ0 340 aaKnown RBP18.41■□□□□ 0.54
CPSF3-203ENST00000475482 H0YGN5 161 aa18.4■□□□□ 0.54
CPSF3-203ENST00000475482 RAD21O60216 631 aa18.4■□□□□ 0.54
CPSF3-203ENST00000475482 COPB2P35606 906 aa18.4■□□□□ 0.54
CPSF3-203ENST00000475482 PPP4R3BQ5MIZ7 849 aa18.4■□□□□ 0.54
CPSF3-203ENST00000475482 NECAB2Q7Z6G3 386 aa18.4■□□□□ 0.54
CPSF3-203ENST00000475482 DPP9Q86TI2 863 aa18.4■□□□□ 0.54
CPSF3-203ENST00000475482 LRRC47Q8N1G4 583 aaKnown RBP18.4■□□□□ 0.54
CPSF3-203ENST00000475482 FEM1BQ9UK73 627 aa18.4■□□□□ 0.54
CPSF3-203ENST00000475482 SMCHD1A6NHR9 2005 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 FCER1AP12319 257 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 CYBAP13498 195 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 CYP2C19P33261 490 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 SLFN13Q68D06 897 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.39■□□□□ 0.53
CPSF3-203ENST00000475482 TRPV1Q8NER1 839 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 GMCL1Q96IK5 515 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 TEX13BQ9BXU2 312 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 NBPF3Q9H094 633 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 SLC38A10Q9HBR0 1119 aa18.39■□□□□ 0.53
CPSF3-203ENST00000475482 LAMA4Q16363 1823 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 TSPY2A6NKD2 308 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 NMT2O60551 498 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 PLA2G6O60733 806 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 SLC34A2O95436 690 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 COL6A1P12109 1028 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 ANAPC15P60006 121 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 SAMD1Q6SPF0 538 aaPredicted RBP18.38■□□□□ 0.53
CPSF3-203ENST00000475482 DPF3Q92784 378 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 TCP11L1Q9NUJ3 509 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 SLC5A4Q9NY91 659 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 DIS3Q9Y2L1 958 aaKnown RBP18.38■□□□□ 0.53
CPSF3-203ENST00000475482 TRIOBPQ9H2D6 2365 aa18.38■□□□□ 0.53
CPSF3-203ENST00000475482 PCP11498 1178 aaKnown RBP18.37■□□□□ 0.53
CPSF3-203ENST00000475482 BMP3P12645 472 aa18.37■□□□□ 0.53
CPSF3-203ENST00000475482 ZNF792Q3KQV3 632 aa18.37■□□□□ 0.53
CPSF3-203ENST00000475482 MAML3Q96JK9 1138 aa18.37■□□□□ 0.53
CPSF3-203ENST00000475482 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
CPSF3-203ENST00000475482 RIPK3Q9Y572 518 aa18.37■□□□□ 0.53
CPSF3-203ENST00000475482 PFASO15067 1338 aa18.36■□□□□ 0.53
CPSF3-203ENST00000475482 RANBP6O60518 1105 aaKnown RBP18.36■□□□□ 0.53
CPSF3-203ENST00000475482 MSCO60682 206 aa18.36■□□□□ 0.53
CPSF3-203ENST00000475482 FDX1P10109 184 aa18.36■□□□□ 0.53
CPSF3-203ENST00000475482 RANBP2P49792 3224 aaKnown RBP18.36■□□□□ 0.53
CPSF3-203ENST00000475482 OAZ1P54368 228 aa18.36■□□□□ 0.53
CPSF3-203ENST00000475482 BECN1Q14457 450 aa18.36■□□□□ 0.53
CPSF3-203ENST00000475482 STAG1Q8WVM7 1258 aa18.36■□□□□ 0.53
CPSF3-203ENST00000475482 MMP19Q99542 508 aa18.36■□□□□ 0.53
CPSF3-203ENST00000475482 DAXXQ9UER7 740 aaPredicted RBP18.36■□□□□ 0.53
CPSF3-203ENST00000475482 DDX20Q9UHI6 824 aaKnown RBP18.36■□□□□ 0.53
CPSF3-203ENST00000475482 DNAJC25-GNG10A0A024R161 153 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 ZBED4O75132 1171 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 KCTD2Q14681 263 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 HABP4Q5JVS0 413 aaKnown RBP18.35■□□□□ 0.53
CPSF3-203ENST00000475482 AKNAD1Q5T1N1 836 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 RNF20Q5VTR2 975 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 SNRNP48Q6IEG0 339 aaKnown RBP18.35■□□□□ 0.53
CPSF3-203ENST00000475482 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 IPO9Q96P70 1041 aaKnown RBP18.35■□□□□ 0.53
CPSF3-203ENST00000475482 PRO3102Q9H379 93 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 C11orf49Q9H6J7 331 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 NRBP1Q9UHY1 535 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 STX8Q9UNK0 236 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 NR2E3Q9Y5X4 410 aa18.35■□□□□ 0.53
CPSF3-203ENST00000475482 TMEM232C9JQI7 657 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 PGK2P07205 417 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 HSPA4P34932 840 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 SLC1A4P43007 532 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 STAT2P52630 851 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 RABEP1Q15276 862 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 RCSD1Q6JBY9 416 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 FAM160B2Q86V87 743 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 CHURC1Q8WUH1 139 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 MAP4K1Q92918 833 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 DSCC1Q9BVC3 393 aa18.34■□□□□ 0.53
CPSF3-203ENST00000475482 ZNF536O15090 1300 aa18.33■□□□□ 0.53
CPSF3-203ENST00000475482 SEPT4O43236 478 aa18.33■□□□□ 0.52
CPSF3-203ENST00000475482 NT5C2P49902 561 aa18.33■□□□□ 0.52
CPSF3-203ENST00000475482 HAND2P61296 217 aa18.33■□□□□ 0.52
CPSF3-203ENST00000475482 MFSD6Q6ZSS7 791 aa18.33■□□□□ 0.52
CPSF3-203ENST00000475482 CPXCR1Q8N123 301 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms