RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 REPS2Q8NFH8 660 aa24.56■■□□□ 1.52
VPS36-203ENST00000475375 SYMPKQ92797 1274 aaKnown RBP24.56■■□□□ 1.52
VPS36-203ENST00000475375 TOX2Q96NM4 488 aa24.56■■□□□ 1.52
VPS36-203ENST00000475375 NUP88Q99567 741 aaPredicted RBP24.56■■□□□ 1.52
VPS36-203ENST00000475375 SLF1Q9BQI6 1058 aa24.56■■□□□ 1.52
VPS36-203ENST00000475375 TEX13BQ9BXU2 312 aa24.56■■□□□ 1.52
VPS36-203ENST00000475375 CTDP1Q9Y5B0 961 aaPredicted RBP24.56■■□□□ 1.52
VPS36-203ENST00000475375 RAB11FIP3O75154 756 aa24.55■■□□□ 1.52
VPS36-203ENST00000475375 ATP5JP18859 108 aa24.55■■□□□ 1.52
VPS36-203ENST00000475375 UBE3CQ15386 1083 aa24.55■■□□□ 1.52
VPS36-203ENST00000475375 KCNA10Q16322 511 aa24.55■■□□□ 1.52
VPS36-203ENST00000475375 STK11IPQ8N1F8 1099 aa24.55■■□□□ 1.52
VPS36-203ENST00000475375 VTI1AQ96AJ9 217 aa24.55■■□□□ 1.52
VPS36-203ENST00000475375 HAUS7Q99871 368 aa24.55■■□□□ 1.52
VPS36-203ENST00000475375 MOXD2PA6NHM9 499 aa24.54■■□□□ 1.52
VPS36-203ENST00000475375 MSL3Q8N5Y2 521 aaKnown RBP24.54■■□□□ 1.52
VPS36-203ENST00000475375 PRDM6Q9NQX0 595 aa24.54■■□□□ 1.52
VPS36-203ENST00000475375 TTC28Q96AY4 2481 aa24.54■■□□□ 1.52
VPS36-203ENST00000475375 SNAI1O95863 264 aaPredicted RBP24.53■■□□□ 1.52
VPS36-203ENST00000475375 TIMP1P01033 207 aa24.53■■□□□ 1.52
VPS36-203ENST00000475375 ZSCAN25Q6NSZ9 544 aa24.53■■□□□ 1.52
VPS36-203ENST00000475375 CPXCR1Q8N123 301 aa24.53■■□□□ 1.52
VPS36-203ENST00000475375 TIFAQ96CG3 184 aa24.53■■□□□ 1.52
VPS36-203ENST00000475375 GLT1D1Q96MS3 346 aa24.53■■□□□ 1.52
VPS36-203ENST00000475375 ARPP21Q9UBL0 812 aaPredicted RBP24.53■■□□□ 1.52
VPS36-203ENST00000475375 SYNGAP1Q96PV0 1343 aa24.53■■□□□ 1.52
VPS36-203ENST00000475375 C6orf222P0C671 652 aaPredicted RBP24.52■■□□□ 1.52
VPS36-203ENST00000475375 MS4A1P11836 297 aa24.52■■□□□ 1.52
VPS36-203ENST00000475375 ZNF576Q9H609 170 aa24.52■■□□□ 1.52
VPS36-203ENST00000475375 MKNK2Q9HBH9 465 aa24.52■■□□□ 1.52
VPS36-203ENST00000475375 SPC25Q9HBM1 224 aa24.52■■□□□ 1.52
VPS36-203ENST00000475375 RIPK3Q9Y572 518 aa24.52■■□□□ 1.52
VPS36-203ENST00000475375 ZBED9Q6R2W3 1325 aa24.52■■□□□ 1.52
VPS36-203ENST00000475375 MYADML2A6NDP7 307 aa24.51■■□□□ 1.51
VPS36-203ENST00000475375 DUSP11O75319 330 aaKnown RBP24.51■■□□□ 1.51
VPS36-203ENST00000475375 CCDC174Q6PII3 467 aa24.51■■□□□ 1.51
VPS36-203ENST00000475375 CCDC129Q6ZRS4 1044 aa24.51■■□□□ 1.51
VPS36-203ENST00000475375 SIRT2Q8IXJ6 389 aa24.51■■□□□ 1.51
VPS36-203ENST00000475375 PRPF38AQ8NAV1 312 aaKnown RBP24.51■■□□□ 1.51
VPS36-203ENST00000475375 USP38Q8NB14 1042 aa24.51■■□□□ 1.51
VPS36-203ENST00000475375 KLHDC9Q8NEP7 349 aa24.51■■□□□ 1.51
VPS36-203ENST00000475375 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.51■■□□□ 1.51
VPS36-203ENST00000475375 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.51■■□□□ 1.51
VPS36-203ENST00000475375 PUS7LQ9H0K6 701 aaKnown RBP24.51■■□□□ 1.51
VPS36-203ENST00000475375 MROH7Q68CQ1 1323 aa24.51■■□□□ 1.51
VPS36-203ENST00000475375 F5H6K3 240 aa24.5■■□□□ 1.51
VPS36-203ENST00000475375 ZBED4O75132 1171 aa24.5■■□□□ 1.51
VPS36-203ENST00000475375 KLRC3Q07444 240 aa24.5■■□□□ 1.51
VPS36-203ENST00000475375 PPIGQ13427 754 aaKnown RBP eCLIP24.5■■□□□ 1.512e-9■■■■■ 36.5
VPS36-203ENST00000475375 PCSK9Q8NBP7 692 aaKnown RBP24.5■■□□□ 1.51
VPS36-203ENST00000475375 KIFC2Q96AC6 838 aa24.5■■□□□ 1.51
VPS36-203ENST00000475375 TBX21Q9UL17 535 aa24.5■■□□□ 1.51
VPS36-203ENST00000475375 DNAJC25-GNG10A0A024R161 153 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 NDUFB10O96000 172 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 RASA1P20936 1047 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 ACVR2BQ13705 512 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 TJAP1Q5JTD0 557 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 CCSAPQ6IQ19 270 aaPredicted RBP24.49■■□□□ 1.51
VPS36-203ENST00000475375 MFSD5Q6N075 450 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 MAMDC4Q6UXC1 1216 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 ANKRD35Q8N283 1001 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 PPM1EQ8WY54 764 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 RAVER2Q9HCJ3 691 aaKnown RBP24.49■■□□□ 1.51
VPS36-203ENST00000475375 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.49■■□□□ 1.51
VPS36-203ENST00000475375 NYAP2Q9P242 653 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 DDX19BQ9UMR2 479 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 COG6Q9Y2V7 657 aa24.49■■□□□ 1.51
VPS36-203ENST00000475375 MINDY4BA8MYZ0 360 aa24.48■■□□□ 1.51
VPS36-203ENST00000475375 ELP1O95163 1332 aa24.48■■□□□ 1.51
VPS36-203ENST00000475375 ASGR1P07306 291 aa24.48■■□□□ 1.51
VPS36-203ENST00000475375 IRX5P78411 483 aaPredicted RBP24.48■■□□□ 1.51
VPS36-203ENST00000475375 ZNF467Q7Z7K2 595 aaPredicted RBP24.48■■□□□ 1.51
VPS36-203ENST00000475375 GAS2L1Q99501 681 aaPredicted RBP24.48■■□□□ 1.51
VPS36-203ENST00000475375 CLIP2Q9UDT6 1046 aa24.48■■□□□ 1.51
VPS36-203ENST00000475375 CST5P28325 142 aaPredicted RBP24.47■■□□□ 1.51
VPS36-203ENST00000475375 CCDC144BQ3MJ40 725 aa24.47■■□□□ 1.51
VPS36-203ENST00000475375 GNASQ5JWF2 1037 aa24.47■■□□□ 1.51
VPS36-203ENST00000475375 TMEM199Q8N511 208 aa24.47■■□□□ 1.51
VPS36-203ENST00000475375 PPP1R12CQ9BZL4 782 aa24.47■■□□□ 1.51
VPS36-203ENST00000475375 ZBTB40Q9NUA8 1239 aa24.47■■□□□ 1.51
VPS36-203ENST00000475375 A0A0U1RQG5 324 aaPredicted RBP24.46■■□□□ 1.51
VPS36-203ENST00000475375 TLR3O15455 904 aaKnown RBP24.46■■□□□ 1.51
VPS36-203ENST00000475375 CSF2RAP15509 400 aa24.46■■□□□ 1.51
VPS36-203ENST00000475375 STRBPQ96SI9 672 aaKnown RBP24.46■■□□□ 1.51
VPS36-203ENST00000475375 ABHD16BQ9H3Z7 469 aa24.46■■□□□ 1.51
VPS36-203ENST00000475375 FBXO40Q9UH90 709 aa24.46■■□□□ 1.51
VPS36-203ENST00000475375 ISY1Q9ULR0 285 aaKnown RBP24.46■■□□□ 1.51
VPS36-203ENST00000475375 GRXCR1A8MXD5 290 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 ARVCFO00192 962 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 ATP2A1O14983 1001 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 ADCY6O43306 1168 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 ACRP10323 421 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 PBX2P40425 430 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 CDK7P50613 346 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 SBK1Q52WX2 424 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 TMEM240Q5SV17 173 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 ARMCX2Q7L311 632 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 PBX4Q9BYU1 374 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 HOMER2Q9NSB8 354 aa24.45■■□□□ 1.5
VPS36-203ENST00000475375 MYH7P12883 1935 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms