RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 RLFQ13129 1914 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 TMEM232C9JQI7 657 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 PGK2P07205 417 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 FGRP09769 529 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 MCCP23508 829 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 SLC1A4P43007 532 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
GPM6B-208ENST00000475307 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
GPM6B-208ENST00000475307 LHX8Q68G74 356 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 MAML3Q96JK9 1138 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 RAVER2Q9HCJ3 691 aaKnown RBP13.56□□□□□ -0.24
GPM6B-208ENST00000475307 DDX20Q9UHI6 824 aaKnown RBP13.56□□□□□ -0.24
GPM6B-208ENST00000475307 ZMYM6O95789 1325 aa13.56□□□□□ -0.24
GPM6B-208ENST00000475307 MSCO60682 206 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 CYBAP13498 195 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 PDE4AP27815 886 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 FAM160B2Q86V87 743 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 CHURC1Q8WUH1 139 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 STAG1Q8WVM7 1258 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 GMCL1Q96IK5 515 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 SLC38A10Q9HBR0 1119 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 MTMR7Q9Y216 660 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 RIPK3Q9Y572 518 aa13.55□□□□□ -0.24
GPM6B-208ENST00000475307 ZNF213O14771 459 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 ATP2A1O14983 1001 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 IGHA2P01877 340 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 FDX1P10109 184 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 STAT2P52630 851 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 ZNF792Q3KQV3 632 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 HABP4Q5JVS0 413 aaKnown RBP13.54□□□□□ -0.24
GPM6B-208ENST00000475307 PRAMEF19Q5SWL8 479 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 AKNAD1Q5T1N1 836 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 RCSD1Q6JBY9 416 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 KCTD1Q719H9 257 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 DDX11Q96FC9 970 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
GPM6B-208ENST00000475307 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
GPM6B-208ENST00000475307 DIS3Q9Y2L1 958 aaKnown RBP13.54□□□□□ -0.24
GPM6B-208ENST00000475307 ZNF236Q9UL36 1845 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 CENPFP49454 3210 aa13.54□□□□□ -0.24
GPM6B-208ENST00000475307 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
GPM6B-208ENST00000475307 OAZ1P54368 228 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 CCDC96Q2M329 555 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 TTC22Q5TAA0 569 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 C7orf61Q8IZ16 206 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 ANKRD35Q8N283 1001 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 TINF2Q9BSI4 451 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 TCP11L1Q9NUJ3 509 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
GPM6B-208ENST00000475307 SEPT4O43236 478 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 PLA2G6O60733 806 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 SLC34A2O95436 690 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 TOP1P11387 765 aaKnown RBP13.52□□□□□ -0.25
GPM6B-208ENST00000475307 NOVP48745 357 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 CHST13Q8NET6 341 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 DCAF4Q8WV16 495 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 TMEM47Q9BQJ4 181 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 FBXO40Q9UH90 709 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 PDE4DIPQ5VU43 2346 aa13.52□□□□□ -0.25
GPM6B-208ENST00000475307 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 PFASO15067 1338 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
GPM6B-208ENST00000475307 COL6A1P12109 1028 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 GSPT1P15170 499 aaKnown RBP13.51□□□□□ -0.25
GPM6B-208ENST00000475307 CCDC174Q6PII3 467 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 RASGRP2Q7LDG7 609 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 ARRDC4Q8NCT1 418 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 ESR2Q92731 530 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 TTC14Q96N46 770 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 SENP6Q9GZR1 1112 aaPredicted RBP13.51□□□□□ -0.25
GPM6B-208ENST00000475307 HOMER2Q9NSB8 354 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 NRBP1Q9UHY1 535 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 CTNNA3Q9UI47 895 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 PRR12Q9ULL5 1215 aa13.51□□□□□ -0.25
GPM6B-208ENST00000475307 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
GPM6B-208ENST00000475307 NEDD4P46934 1319 aa13.5□□□□□ -0.25
GPM6B-208ENST00000475307 DNM1LO00429 736 aa13.5□□□□□ -0.25
GPM6B-208ENST00000475307 SNAP25P60880 206 aa13.5□□□□□ -0.25
GPM6B-208ENST00000475307 IMMTQ16891 758 aaKnown RBP13.5□□□□□ -0.25
GPM6B-208ENST00000475307 GJC2Q5T442 439 aaPredicted RBP13.5□□□□□ -0.25
GPM6B-208ENST00000475307 AGBL1Q96MI9 1066 aa13.5□□□□□ -0.25
GPM6B-208ENST00000475307 ZKSCAN3Q9BRR0 538 aa13.5□□□□□ -0.25
GPM6B-208ENST00000475307 ACAD9Q9H845 621 aa13.5□□□□□ -0.25
GPM6B-208ENST00000475307 ZMYND8Q9ULU4 1186 aaPredicted RBP13.5□□□□□ -0.25
GPM6B-208ENST00000475307 CNPY2Q9Y2B0 182 aa13.5□□□□□ -0.25
GPM6B-208ENST00000475307 ZNF536O15090 1300 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 FRMPD2Q68DX3 1309 aaPredicted RBP13.49□□□□□ -0.25
GPM6B-208ENST00000475307 DNAJC25-GNG10A0A024R161 153 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 KDM4AO75164 1064 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 ALAS1P13196 640 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 TKFCQ3LXA3 575 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 TTBK2Q6IQ55 1244 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
GPM6B-208ENST00000475307 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms