RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 SWAP70Q9UH65 585 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 SERPINB13Q9UIV8 391 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 DDX49Q9Y6V7 483 aaKnown RBP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 CNTNAP1P78357 1384 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 CNTNAP5Q8WYK1 1306 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 FZD9O00144 591 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 DEXIO95424 95 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 MBD3O95983 291 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 TSPY3P0CV98 308 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 TSPY8P0CW00 308 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 AKR1B1P15121 316 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 GCGRP47871 477 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.61
ITGA6-210ENST00000475302 KRT85P78386 507 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 GUCY1B3Q02153 619 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 NPY5RQ15761 445 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 FKBP1CQ5VVH2 108 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 FOXP4Q8IVH2 680 aaPredicted RBP11.21□□□□□ -0.61
ITGA6-210ENST00000475302 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 PGBD1Q96JS3 809 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 REPIN1Q9BWE0 567 aaKnown RBP11.21□□□□□ -0.61
ITGA6-210ENST00000475302 SLC26A6Q9BXS9 759 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 TDRD3Q9H7E2 651 aaKnown RBP11.21□□□□□ -0.61
ITGA6-210ENST00000475302 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
ITGA6-210ENST00000475302 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.61
ITGA6-210ENST00000475302 SNHG28P0DPA3 235 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 VEGFAP15692 232 aaPredicted RBP11.2□□□□□ -0.62
ITGA6-210ENST00000475302 MMP14P50281 582 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 UBE2HP62256 183 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 MAP3K10Q02779 954 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 SIAH1Q8IUQ4 282 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 PNMA1Q8ND90 353 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 USP28Q96RU2 1077 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 SCAND2PQ9GZW5 306 aaPredicted RBP11.2□□□□□ -0.62
ITGA6-210ENST00000475302 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 TMEM63CQ9P1W3 806 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 PI4KBQ9UBF8 816 aa11.2□□□□□ -0.62
ITGA6-210ENST00000475302 ZNF70Q9UC06 446 aaPredicted RBP11.2□□□□□ -0.62
ITGA6-210ENST00000475302 FIBPO43427 364 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 CYTH3O43739 400 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 MMP1P03956 469 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 TOP1P11387 765 aaKnown RBP11.19□□□□□ -0.62
ITGA6-210ENST00000475302 CD46P15529 392 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 SMARCA1P28370 1054 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
ITGA6-210ENST00000475302 ZNF445P59923 1031 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 JAG1P78504 1218 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 RRP1BQ14684 758 aaKnown RBP11.19□□□□□ -0.62
ITGA6-210ENST00000475302 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 BRAPQ7Z569 592 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 GAS2L3Q86XJ1 694 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 WASF1Q92558 559 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 TNFRSF25Q93038 417 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 MKL1Q969V6 931 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 CCDC17Q96LX7 622 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 KAT14Q9H8E8 782 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 BCS1LQ9Y276 419 aa11.19□□□□□ -0.62
ITGA6-210ENST00000475302 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
ITGA6-210ENST00000475302 SHTN1A0MZ66 631 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 HLA-DOAP06340 250 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 RBM5P52756 815 aaKnown RBP eCLIP11.18□□□□□ -0.62
ITGA6-210ENST00000475302 TCP10Q12799 353 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 PPP1R18Q6NYC8 613 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 TRIM22Q8IYM9 498 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
ITGA6-210ENST00000475302 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 PHF20Q9BVI0 1012 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 FTOQ9C0B1 505 aaKnown RBP eCLIP11.18□□□□□ -0.62
ITGA6-210ENST00000475302 GZF1Q9H116 711 aaPredicted RBP11.18□□□□□ -0.62
ITGA6-210ENST00000475302 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 POLR3EQ9NVU0 708 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 CFAP45Q9UL16 551 aa11.18□□□□□ -0.62
ITGA6-210ENST00000475302 BTBD18B2RXH4 712 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 RPS12P25398 132 aaKnown RBP11.17□□□□□ -0.62
ITGA6-210ENST00000475302 KIF5BP33176 963 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 CLCN1P35523 988 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 GNAQP50148 359 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 TOB1P50616 345 aaPredicted RBP11.17□□□□□ -0.62
ITGA6-210ENST00000475302 RASSF7Q02833 373 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 PTPAQ15257 358 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 DLGAP5Q15398 846 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 PFKFB3Q16875 520 aaPredicted RBP11.17□□□□□ -0.62
ITGA6-210ENST00000475302 CSPP1Q1MSJ5 1256 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 ZSCAN23Q3MJ62 389 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 CAVIN1Q6NZI2 390 aaKnown RBP11.17□□□□□ -0.62
ITGA6-210ENST00000475302 RASGRP2Q7LDG7 609 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 FAM83AQ86UY5 434 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 LINC00301Q8NCQ3 95 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 DPF2Q92785 391 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 ZNF396Q96N95 335 aaPredicted RBP11.17□□□□□ -0.62
ITGA6-210ENST00000475302 LZTS2Q9BRK4 669 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 SPZ1Q9BXG8 430 aa11.17□□□□□ -0.62
ITGA6-210ENST00000475302 FOXP1Q9H334 677 aaPredicted RBP11.17□□□□□ -0.62
ITGA6-210ENST00000475302 SPON1Q9HCB6 807 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms