RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LGSNQ5TDP6 509 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 MYOCDQ8IZQ8 938 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 APOL6Q9BWW8 343 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 KDM3AQ9Y4C1 1321 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 CYP4A11Q02928 519 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 PAK2Q13177 524 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 RPS6KA2Q15349 733 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 GNPTABQ3T906 1256 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 NXNQ6DKJ4 435 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 PNMA8AQ86V59 439 aaPredicted RBP12.07□□□□□ -0.48
VAPB-204ENST00000475243 LMBRD1Q9NUN5 540 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 BABAM1Q9NWV8 329 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 CACNA2D3Q8IZS8 1091 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 LRRIQ4A6NIV6 560 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 HOXB7P09629 217 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 INPP5BP32019 993 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 PPP2R5BQ15173 497 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 SH2D4BQ5SQS7 431 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 FGAP02671 866 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 SARNPP82979 210 aaKnown RBP12.07□□□□□ -0.48
VAPB-204ENST00000475243 SRGAP1Q7Z6B7 1085 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 FAM178BQ8IXR5 827 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
VAPB-204ENST00000475243 UHMK1Q8TAS1 419 aaKnown RBP12.07□□□□□ -0.48
VAPB-204ENST00000475243 PER1O15534 1290 aaPredicted RBP12.06□□□□□ -0.48
VAPB-204ENST00000475243 GNA14O95837 355 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 POLR2MP0CAP2 368 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 FBXO11Q86XK2 927 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 ATP2A3Q93084 1043 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 ATP8A2Q9NTI2 1148 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 POLGP54098 1239 aaPredicted RBP12.06□□□□□ -0.48
VAPB-204ENST00000475243 ZBTB38Q8NAP3 1195 aaPredicted RBP12.06□□□□□ -0.48
VAPB-204ENST00000475243 SAR1BQ9Y6B6 198 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 KRIT1O00522 736 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 UBXN2AP68543 259 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 NOSTRINQ8IVI9 506 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 PPM1KQ8N3J5 372 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 RTEL1Q9NZ71 1219 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 TMEM63CQ9P1W3 806 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 TPCN1Q9ULQ1 816 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 BICRAQ9NZM4 1560 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 OATP04181 439 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 HSPD1P10809 573 aaKnown RBP12.06□□□□□ -0.48
VAPB-204ENST00000475243 BTDP43251 543 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 TUBB2AQ13885 445 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 TUBB2BQ9BVA1 445 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 AS3MTQ9HBK9 375 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 CLRN2A0PK11 232 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 POLR2FP61218 127 aaKnown RBP12.06□□□□□ -0.48
VAPB-204ENST00000475243 POMGNT1Q8WZA1 660 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 CABS1Q96KC9 395 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 VCX3BQ9H321 246 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 HAUS2Q9NVX0 235 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 KDRP35968 1356 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 PLCB1Q9NQ66 1216 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 PDE6AP16499 860 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 ADORA1P30542 326 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 ADCY8P40145 1251 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 DMP1Q13316 513 aaPredicted RBP12.06□□□□□ -0.48
VAPB-204ENST00000475243 DCLK2Q8N568 766 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
VAPB-204ENST00000475243 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
VAPB-204ENST00000475243 STAM2O75886 525 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 PTGDRQ13258 359 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 ADALQ6DHV7 355 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 SCYL1Q96KG9 808 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 USP28Q96RU2 1077 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 RAB17Q9H0T7 212 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 TNKSO95271 1327 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 OAS2P29728 719 aaKnown RBP12.05□□□□□ -0.48
VAPB-204ENST00000475243 CHRNDQ07001 517 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 Q3C1V9 767 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 GREM2Q9H772 168 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 DISC1Q9NRI5 854 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 CLIC4Q9Y696 253 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 BTBD18B2RXH4 712 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 NAA35Q5VZE5 725 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 RASSF4Q9H2L5 321 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 RGS16O15492 202 aaPredicted RBP12.05□□□□□ -0.48
VAPB-204ENST00000475243 TNNC2P02585 160 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 TTBK2Q6IQ55 1244 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 SKA2Q8WVK7 121 aaPredicted RBP12.05□□□□□ -0.48
VAPB-204ENST00000475243 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
VAPB-204ENST00000475243 RRAGDQ9NQL2 400 aaPredicted RBP12.05□□□□□ -0.48
VAPB-204ENST00000475243 CCPG1Q9ULG6 757 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 NDUFA8P51970 172 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 KCTD1Q719H9 257 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 ZBTB8OSQ8IWT0 167 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 FAM193BQ96PV7 902 aaPredicted RBP12.05□□□□□ -0.48
VAPB-204ENST00000475243 DPH5Q9H2P9 285 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 RAB20Q9NX57 234 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 ERVV-2B6SEH9 535 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 ARMCX5Q6P1M9 558 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 CCDC13Q8IYE1 715 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 NME8Q8N427 588 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms