RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 SENP6Q9GZR1 1112 aaPredicted RBP14.05□□□□□ -0.16
CLIP2-204ENST00000474962 MTMR4Q9NYA4 1195 aa14.05□□□□□ -0.16
CLIP2-204ENST00000474962 MYH8P13535 1937 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 SLC25A27O95847 323 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 TFAP4Q01664 338 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 RIOX2Q8IUF8 465 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 CHMP4CQ96CF2 233 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 MAML3Q96JK9 1138 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 MMP19Q99542 508 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 NAPBQ9H115 298 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 ZNF287Q9HBT7 754 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 SLC5A4Q9NY91 659 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 ZNF214Q9UL59 606 aaPredicted RBP14.04□□□□□ -0.16
CLIP2-204ENST00000474962 RIPK3Q9Y572 518 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 ROBO3Q96MS0 1386 aa14.04□□□□□ -0.16
CLIP2-204ENST00000474962 COL6A3P12111 3177 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 SLC4A3P48751 1232 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 CTDSPL2Q05D32 466 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 PDE4BQ07343 736 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 PPARAQ07869 468 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 GJC2Q5T442 439 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-204ENST00000474962 VPS53Q5VIR6 699 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 PRPF38AQ8NAV1 312 aaKnown RBP14.03□□□□□ -0.16
CLIP2-204ENST00000474962 NEDD1Q8NHV4 660 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 GDF15Q99988 308 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 SLF1Q9BQI6 1058 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 TACC3Q9Y6A5 838 aa14.03□□□□□ -0.16
CLIP2-204ENST00000474962 ALPK3Q96L96 1907 aa14.02□□□□□ -0.16
CLIP2-204ENST00000474962 A0A0D9SFI3 127 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 MSCO60682 206 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 TTLL1O95922 423 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 TSPY3P0CV98 308 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 TSPY8P0CW00 308 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 TAL1P17542 331 aaPredicted RBP14.02□□□□□ -0.17
CLIP2-204ENST00000474962 CHMLP26374 656 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 ATN1P54259 1190 aaPredicted RBP14.02□□□□□ -0.17
CLIP2-204ENST00000474962 ZNF792Q3KQV3 632 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 CPXCR1Q8N123 301 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 LRRC47Q8N1G4 583 aaKnown RBP14.02□□□□□ -0.17
CLIP2-204ENST00000474962 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
CLIP2-204ENST00000474962 SEPT4O43236 478 aa14.01□□□□□ -0.17
CLIP2-204ENST00000474962 CDC45O75419 566 aa14.01□□□□□ -0.17
CLIP2-204ENST00000474962 SLC3A2P08195 630 aaKnown RBP14.01□□□□□ -0.17
CLIP2-204ENST00000474962 MAGEA10P43363 369 aaPredicted RBP14.01□□□□□ -0.17
CLIP2-204ENST00000474962 KCTD2Q14681 263 aa14.01□□□□□ -0.17
CLIP2-204ENST00000474962 SLFN13Q68D06 897 aa14.01□□□□□ -0.17
CLIP2-204ENST00000474962 SNRNP48Q6IEG0 339 aaKnown RBP14.01□□□□□ -0.17
CLIP2-204ENST00000474962 KIAA1211Q6ZU35 1233 aa14.01□□□□□ -0.17
CLIP2-204ENST00000474962 IL17RBQ9NRM6 502 aa14.01□□□□□ -0.17
CLIP2-204ENST00000474962 ZNFX1Q9P2E3 1918 aaKnown RBP14.01□□□□□ -0.17
CLIP2-204ENST00000474962 CCDC171Q6TFL3 1326 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 DNM1LO00429 736 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 SOX1O00570 391 aaPredicted RBP14□□□□□ -0.17
CLIP2-204ENST00000474962 NMT2O60551 498 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 ZBED4O75132 1171 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 BMP8BP34820 402 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 ARRDC4Q8NCT1 418 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 GMCL1P1Q8NEA9 526 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 TINF2Q9BSI4 451 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 TEX13BQ9BXU2 312 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 RAVER2Q9HCJ3 691 aaKnown RBP14□□□□□ -0.17
CLIP2-204ENST00000474962 FEM1BQ9UK73 627 aa14□□□□□ -0.17
CLIP2-204ENST00000474962 A0A0G2JMZ2 1700 aa13.99□□□□□ -0.17
CLIP2-204ENST00000474962 RAD50Q92878 1312 aa13.99□□□□□ -0.17
CLIP2-204ENST00000474962 SMCHD1A6NHR9 2005 aa13.99□□□□□ -0.17
CLIP2-204ENST00000474962 TMEM232C9JQI7 657 aa13.99□□□□□ -0.17
CLIP2-204ENST00000474962 FGAP02671 866 aa13.99□□□□□ -0.17
CLIP2-204ENST00000474962 MCCP23508 829 aa13.99□□□□□ -0.17
CLIP2-204ENST00000474962 LRCH3Q96II8 777 aa13.99□□□□□ -0.17
CLIP2-204ENST00000474962 SLC38A10Q9HBR0 1119 aa13.99□□□□□ -0.17
CLIP2-204ENST00000474962 DIS3Q9Y2L1 958 aaKnown RBP13.99□□□□□ -0.17
CLIP2-204ENST00000474962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLIP2-204ENST00000474962 COL11A1P12107 1806 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-204ENST00000474962 GREB1LQ9C091 1923 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-204ENST00000474962 A0A1W2PPC1 479 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 ATP2A1O14983 1001 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 BMP3P12645 472 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 ADCYAP1R1P41586 468 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-204ENST00000474962 LRRC41Q15345 812 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 ALX1Q15699 326 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 FERMT2Q96AC1 680 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 DDX11Q96FC9 970 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 ISY1Q9ULR0 285 aaKnown RBP13.98□□□□□ -0.17
CLIP2-204ENST00000474962 STX8Q9UNK0 236 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 CTDP1Q9Y5B0 961 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-204ENST00000474962 PARP14Q460N5 1801 aa13.98□□□□□ -0.17
CLIP2-204ENST00000474962 DNAJC25-GNG10A0A024R161 153 aa13.97□□□□□ -0.17
CLIP2-204ENST00000474962 TSPY2A6NKD2 308 aa13.97□□□□□ -0.17
CLIP2-204ENST00000474962 RANBP6O60518 1105 aaKnown RBP13.97□□□□□ -0.17
CLIP2-204ENST00000474962 SNAI1O95863 264 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-204ENST00000474962 ZNF865P0CJ78 1059 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-204ENST00000474962 COPB2P35606 906 aa13.97□□□□□ -0.17
CLIP2-204ENST00000474962 SLC1A4P43007 532 aa13.97□□□□□ -0.17
CLIP2-204ENST00000474962 SNAP25P60880 206 aa13.97□□□□□ -0.17
CLIP2-204ENST00000474962 SLC39A5Q6ZMH5 540 aa13.97□□□□□ -0.17
CLIP2-204ENST00000474962 ZNF589Q86UQ0 364 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-204ENST00000474962 UBE2OQ9C0C9 1292 aaKnown RBP13.97□□□□□ -0.17
CLIP2-204ENST00000474962 ANAPC4Q9UJX5 808 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms