RNA–Protein interactions for RNA: ENST00000474955.5

ATP13A1-208, Transcript of ATPase 13A1, humanhuman

TSL 5

Gene ATP13A1, Length 927 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-208ENST00000474955 HMX1Q9NP08 348 aaPredicted RBP16.46■□□□□ 0.23
ATP13A1-208ENST00000474955 COBLO75128 1261 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 ZBED4O75132 1171 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 IGHA2P01877 340 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 COPB2P35606 906 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 STAT2P52630 851 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 DPP9Q86TI2 863 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 FAM160B2Q86V87 743 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 CHURC1Q8WUH1 139 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 DEFB118Q96PH6 123 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 TEX13BQ9BXU2 312 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.45■□□□□ 0.227e-7■■■□□ 15.6
ATP13A1-208ENST00000474955 SLC38A10Q9HBR0 1119 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 FLRT1Q9NZU1 646 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 COL11A1P12107 1806 aaPredicted RBP16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 LAMA4Q16363 1823 aa16.45■□□□□ 0.22
ATP13A1-208ENST00000474955 KDM4AO75164 1064 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 FDX1P10109 184 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 FCER1AP12319 257 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 CAPN2P17655 700 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 CACNB2Q08289 660 aaPredicted RBP16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 BMP2KLQ5H9B9 411 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 KCTD1Q719H9 257 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 RASGRP2Q7LDG7 609 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 CRISPLD2Q9H0B8 497 aa16.44■□□□□ 0.22
ATP13A1-208ENST00000474955 ZNF236Q9UL36 1845 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 B4E1Z4 1266 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 OAZ1P54368 228 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 CCDC178Q5BJE1 867 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 MFSD14CQ5VZR4 134 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 OLFML2BQ68BL8 750 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 SNRNP48Q6IEG0 339 aaKnown RBP16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 DGKHQ86XP1 1220 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 CPXCR1Q8N123 301 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 ANKS1AQ92625 1134 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 CHMP4CQ96CF2 233 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 KRT23Q9C075 422 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 ZSWIM5Q9P217 1185 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 RIPK3Q9Y572 518 aa16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 CTDP1Q9Y5B0 961 aaPredicted RBP16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
ATP13A1-208ENST00000474955 NEFLP07196 543 aa16.42■□□□□ 0.22
ATP13A1-208ENST00000474955 UBE2Q1Q7Z7E8 422 aa16.42■□□□□ 0.22
ATP13A1-208ENST00000474955 IQCA1Q86XH1 822 aa16.42■□□□□ 0.22
ATP13A1-208ENST00000474955 MAP4K1Q92918 833 aa16.42■□□□□ 0.22
ATP13A1-208ENST00000474955 MMP19Q99542 508 aa16.42■□□□□ 0.22
ATP13A1-208ENST00000474955 CNNM2Q9H8M5 875 aa16.42■□□□□ 0.22
ATP13A1-208ENST00000474955 SLC5A4Q9NY91 659 aa16.42■□□□□ 0.22
ATP13A1-208ENST00000474955 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
ATP13A1-208ENST00000474955 TFRCP02786 760 aaKnown RBP16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 CYP21A2P08686 494 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 PDHBP11177 359 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 CCND3P30281 292 aaPredicted RBP16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 CYP2C19P33261 490 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 IKQ13123 557 aaPredicted RBP16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 KCTD2Q14681 263 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 TTBK2Q6IQ55 1244 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 BTNL9Q6UXG8 535 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 ZNF536O15090 1300 aa16.41■□□□□ 0.22
ATP13A1-208ENST00000474955 ZNF792Q3KQV3 632 aa16.4■□□□□ 0.22
ATP13A1-208ENST00000474955 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
ATP13A1-208ENST00000474955 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
ATP13A1-208ENST00000474955 DIS3Q9Y2L1 958 aaKnown RBP16.4■□□□□ 0.22
ATP13A1-208ENST00000474955 PDE4DIPQ5VU43 2346 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 PGK2P07205 417 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 SLC4A3P48751 1232 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 ZNF543Q08ER8 600 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 ENAHQ8N8S7 591 aaPredicted RBP16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 CHST13Q8NET6 341 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 LSG1Q9H089 658 aaKnown RBP16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 GPCPD1Q9NPB8 672 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 OGDHLQ9ULD0 1010 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 RBM8AQ9Y5S9 174 aaKnown RBP16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 TAF6LQ9Y6J9 622 aa16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 FRMPD2Q68DX3 1309 aaPredicted RBP16.39■□□□□ 0.21
ATP13A1-208ENST00000474955 DNAJC25-GNG10A0A024R161 153 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 FARP2O94887 1054 aaPredicted RBP16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 CYBAP13498 195 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 SLC16A2P36021 539 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 SNAP25P60880 206 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 TRDNQ13061 729 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 SYDE2Q5VT97 1194 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 LHX8Q68G74 356 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 CYB5R4Q7L1T6 521 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 TRPV1Q8NER1 839 aa16.38■□□□□ 0.21
ATP13A1-208ENST00000474955 AGBL1Q96MI9 1066 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms