RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 TSPY2A6NKD2 308 aa16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 ZNF467Q7Z7K2 595 aaPredicted RBP16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 C7orf61Q8IZ16 206 aa16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 TRPV1Q8NER1 839 aa16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 TINF2Q9BSI4 451 aa16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 PFASO15067 1338 aa16.63■□□□□ 0.25
DNMT3A-211ENST00000474887 HIP1O00291 1037 aa16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 NOVP48745 357 aa16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 NUCB1Q02818 461 aa16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 STAG1Q8WVM7 1258 aa16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 DDX11Q96FC9 970 aa16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 GDF15Q99988 308 aa16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 LNPKQ9C0E8 428 aa16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 CNPY2Q9Y2B0 182 aa16.62■□□□□ 0.25
DNMT3A-211ENST00000474887 TRIM6-TRIM34B2RNG4 842 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 KBTBD13C9JR72 458 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 FOXP2O15409 715 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 SLC1A4P43007 532 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 STAT2P52630 851 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 TKFCQ3LXA3 575 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 FAM47AQ5JRC9 791 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 MAMDC4Q6UXC1 1216 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 TCP11L1Q9NUJ3 509 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 PNMA2Q9UL42 364 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 SYNGAP1Q96PV0 1343 aa16.61■□□□□ 0.25
DNMT3A-211ENST00000474887 DNAJC25-GNG10A0A024R161 153 aa16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 FGAP02671 866 aa16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 RARBP10826 455 aa16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 C1orf53Q5VUE5 145 aa16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 KIFC2Q96AC6 838 aa16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 TTC14Q96N46 770 aa16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 SENP6Q9GZR1 1112 aaPredicted RBP16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 STX8Q9UNK0 236 aa16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 RANBP2P49792 3224 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-211ENST00000474887 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 RANBP6O60518 1105 aaKnown RBP16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 HSPD1P10809 573 aaKnown RBP16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 GPR153Q6NV75 609 aa16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 CCDC129Q6ZRS4 1044 aa16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 RNF180Q86T96 592 aa16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 LRRC47Q8N1G4 583 aaKnown RBP16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 RNF41Q9H4P4 317 aaPredicted RBP16.59■□□□□ 0.25
DNMT3A-211ENST00000474887 PGK2P07205 417 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 AKR1A1P14550 325 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 CTDSPL2Q05D32 466 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 LRRC26Q2I0M4 334 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 CCDC178Q5BJE1 867 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 VPS53Q5VIR6 699 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 PLEKHM2Q8IWE5 1019 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 ANKRD35Q8N283 1001 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 FAM227BQ96M60 508 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 CCDC171Q6TFL3 1326 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 PARP14Q460N5 1801 aa16.58■□□□□ 0.24
DNMT3A-211ENST00000474887 A0A0D9SFI3 127 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 TOP1P11387 765 aaKnown RBP16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 SDSP20132 328 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 MCCP23508 829 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 NMIQ13287 307 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 B4GALNT3Q6L9W6 998 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 MFSD6Q6ZSS7 791 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 TSEN34Q9BSV6 310 aaKnown RBP16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 RAVER2Q9HCJ3 691 aaKnown RBP16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 XPNPEP3Q9NQH7 507 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 PRKAG2Q9UGJ0 569 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 FAM184BQ9ULE4 1060 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 ZMYND8Q9ULU4 1186 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 RIPK3Q9Y572 518 aa16.57■□□□□ 0.24
DNMT3A-211ENST00000474887 IGHDP01880 384 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 IKQ13123 557 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 SNX17Q15036 470 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 LRRC41Q15345 812 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 PRAMEF19Q5SWL8 479 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 GJC2Q5T442 439 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 SLC39A5Q6ZMH5 540 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 EXOC6Q8TAG9 804 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 LBHD1Q9BQE6 289 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 ABHD16BQ9H3Z7 469 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 PHF24Q9UPV7 400 aa16.56■□□□□ 0.24
DNMT3A-211ENST00000474887 MAGEA10P43363 369 aaPredicted RBP16.55■□□□□ 0.24
DNMT3A-211ENST00000474887 LRIT3Q3SXY7 679 aa16.55■□□□□ 0.24
DNMT3A-211ENST00000474887 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
DNMT3A-211ENST00000474887 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
DNMT3A-211ENST00000474887 DIAPH3Q9NSV4 1193 aa16.55■□□□□ 0.24
DNMT3A-211ENST00000474887 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
DNMT3A-211ENST00000474887 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
DNMT3A-211ENST00000474887 ZNFX1Q9P2E3 1918 aaKnown RBP16.55■□□□□ 0.24
DNMT3A-211ENST00000474887 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms