RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 CNMDO75829 334 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 SEC24BO95487 1268 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 GOLGA8HP0CJ92 632 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 ANAPC15P60006 121 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
COPS6-208ENST00000474823 PKN2Q16513 984 aaKnown RBP12.29□□□□□ -0.44
COPS6-208ENST00000474823 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 WDR78Q5VTH9 848 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 OTOP1Q7RTM1 612 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 NUP133Q8WUM0 1156 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 TCEANC2Q96MN5 208 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 ARHGAP39Q9C0H5 1083 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 UPF2Q9HAU5 1272 aaKnown RBP12.29□□□□□ -0.44
COPS6-208ENST00000474823 SLC12A7Q9Y666 1083 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 CYP46A1Q9Y6A2 500 aa12.29□□□□□ -0.44
COPS6-208ENST00000474823 DHX16O60231 1041 aaKnown RBP12.28□□□□□ -0.44
COPS6-208ENST00000474823 DDAH1O94760 285 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 SLC25A27O95847 323 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 CALM1P0DP23 149 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 CALM2P0DP24 149 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 CALM3P0DP25 149 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 COPB2P35606 906 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 SLC16A2P36021 539 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 STAT3P40763 770 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 PRMT2P55345 433 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 TMEM132BQ14DG7 1078 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 TTBK2Q6IQ55 1244 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 BTNL9Q6UXG8 535 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 NCAPG2Q86XI2 1143 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 ZNF654Q8IZM8 581 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 CPXCR1Q8N123 301 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
COPS6-208ENST00000474823 TRIM47Q96LD4 638 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 TM6SF1Q9BZW5 370 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 SLC38A10Q9HBR0 1119 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 SENP2Q9HC62 589 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
COPS6-208ENST00000474823 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 IVNS1ABPQ9Y6Y0 642 aa12.28□□□□□ -0.44
COPS6-208ENST00000474823 CPA1P15085 419 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 KIF5BP33176 963 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 SLC4A3P48751 1232 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 OAZ1P54368 228 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 TROAPQ12815 778 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 COL9A3Q14050 684 aaPredicted RBP12.27□□□□□ -0.45
COPS6-208ENST00000474823 GRM4Q14833 912 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 COL13A1Q5TAT6 717 aaPredicted RBP12.27□□□□□ -0.45
COPS6-208ENST00000474823 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.45
COPS6-208ENST00000474823 RUFY3Q7L099 469 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 PLEKHH3Q7Z736 793 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 SGMS1Q86VZ5 419 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 SHCBP1Q8NEM2 672 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 MOV10L1Q9BXT6 1211 aaKnown RBP12.27□□□□□ -0.45
COPS6-208ENST00000474823 TEX13BQ9BXU2 312 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 UBA5Q9GZZ9 404 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 PORCNQ9H237 461 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 MROH8Q9H579 483 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 RAVER2Q9HCJ3 691 aaKnown RBP12.27□□□□□ -0.45
COPS6-208ENST00000474823 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 SRRDQ9UH36 339 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 NAP1L2Q9ULW6 460 aaPredicted RBP12.27□□□□□ -0.45
COPS6-208ENST00000474823 RLFQ13129 1914 aa12.27□□□□□ -0.45
COPS6-208ENST00000474823 KLRF2D3W0D1 207 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 ATP2A1O14983 1001 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 ERCC3P19447 782 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 CTGFP29279 349 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 GNAQP50148 359 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 CCDC174Q6PII3 467 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 Q6ZUG5 572 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 GPR142Q7Z601 462 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 RIOX2Q8IUF8 465 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 REPS2Q8NFH8 660 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 RAET1EQ8TD07 263 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 SOCS4Q8WXH5 440 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 MAP3K14Q99558 947 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 MYL10Q9BUA6 226 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 MAD2L2Q9UI95 211 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
COPS6-208ENST00000474823 ZNF214Q9UL59 606 aaPredicted RBP12.26□□□□□ -0.45
COPS6-208ENST00000474823 PARP14Q460N5 1801 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 KLF18A0A0U1RQI7 1052 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 PALM3A6NDB9 673 aaPredicted RBP12.25□□□□□ -0.45
COPS6-208ENST00000474823 ZBTB43O43298 467 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 SNAP25P60880 206 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 CAP1Q01518 475 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 PRKCZQ05513 592 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 FBXO46Q6PJ61 603 aaPredicted RBP12.25□□□□□ -0.45
COPS6-208ENST00000474823 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 ADGRF4Q8IZF3 695 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 STAG2Q8N3U4 1231 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 BRF1Q92994 677 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
COPS6-208ENST00000474823 MCOLN1Q9GZU1 580 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 RANBP17Q9H2T7 1088 aaKnown RBP12.25□□□□□ -0.45
COPS6-208ENST00000474823 VAT1LQ9HCJ6 419 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 PDRG1Q9NUG6 133 aa12.25□□□□□ -0.45
COPS6-208ENST00000474823 FBXO40Q9UH90 709 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms