RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TRERF1Q96PN7 1200 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 KCNJ14Q9UNX9 436 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 TNKSO95271 1327 aa23.99■■□□□ 1.43
SH3D21-202ENST00000474766 PDS5AQ29RF7 1337 aaKnown RBP23.99■■□□□ 1.43
SH3D21-202ENST00000474766 DPF2Q92785 391 aa23.99■■□□□ 1.43
SH3D21-202ENST00000474766 KIFC2Q96AC6 838 aa23.99■■□□□ 1.43
SH3D21-202ENST00000474766 ADAM21Q9UKJ8 722 aa23.99■■□□□ 1.43
SH3D21-202ENST00000474766 KCNH3Q9ULD8 1083 aa23.99■■□□□ 1.43
SH3D21-202ENST00000474766 POTEB2H3BUK9 544 aa23.98■■□□□ 1.43
SH3D21-202ENST00000474766 MYO1CO00159 1063 aa23.98■■□□□ 1.43
SH3D21-202ENST00000474766 PCP11498 1178 aaKnown RBP23.98■■□□□ 1.43
SH3D21-202ENST00000474766 GNG11P61952 73 aa23.98■■□□□ 1.43
SH3D21-202ENST00000474766 BAG1Q99933 345 aaPredicted RBP23.98■■□□□ 1.43
SH3D21-202ENST00000474766 RNF26Q9BY78 433 aaPredicted RBP23.98■■□□□ 1.43
SH3D21-202ENST00000474766 ZCCHC17Q9NP64 241 aaKnown RBP23.98■■□□□ 1.43
SH3D21-202ENST00000474766 TAOK2Q9UL54 1235 aa23.98■■□□□ 1.43
SH3D21-202ENST00000474766 IVLP07476 585 aa23.98■■□□□ 1.43
SH3D21-202ENST00000474766 GPC2Q8N158 579 aa23.98■■□□□ 1.43
SH3D21-202ENST00000474766 GJA3Q9Y6H8 435 aa23.98■■□□□ 1.43
SH3D21-202ENST00000474766 G3V3G9 751 aa23.97■■□□□ 1.43
SH3D21-202ENST00000474766 SMIM22K7EJ46 135 aa23.97■■□□□ 1.43
SH3D21-202ENST00000474766 PTPREP23469 700 aa23.97■■□□□ 1.43
SH3D21-202ENST00000474766 ACTN2P35609 894 aa23.97■■□□□ 1.43
SH3D21-202ENST00000474766 DYNLL1P63167 89 aaKnown RBP23.97■■□□□ 1.43
SH3D21-202ENST00000474766 LONRF2Q1L5Z9 754 aa23.97■■□□□ 1.43
SH3D21-202ENST00000474766 LONRF3Q496Y0 759 aa23.97■■□□□ 1.43
SH3D21-202ENST00000474766 DCAF8Q5TAQ9 597 aa23.97■■□□□ 1.43
SH3D21-202ENST00000474766 METTL16Q86W50 562 aaKnown RBP23.97■■□□□ 1.43
SH3D21-202ENST00000474766 CMTR1Q8N1G2 835 aaKnown RBP23.97■■□□□ 1.43
SH3D21-202ENST00000474766 ENAHQ8N8S7 591 aaPredicted RBP23.97■■□□□ 1.43
SH3D21-202ENST00000474766 NUP133Q8WUM0 1156 aa23.97■■□□□ 1.43
SH3D21-202ENST00000474766 ZSCAN10Q96SZ4 725 aaPredicted RBP23.97■■□□□ 1.43
SH3D21-202ENST00000474766 POTECB2RU33 542 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 RPS6KA5O75582 802 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 HIBADHP31937 336 aaKnown RBP23.96■■□□□ 1.43
SH3D21-202ENST00000474766 TUBB2AQ13885 445 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 CIAPIN1Q6FI81 312 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 CCDC82Q8N4S0 544 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 WDR24Q96S15 920 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 TUBB2BQ9BVA1 445 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 FBXO2Q9UK22 296 aaPredicted RBP23.96■■□□□ 1.43
SH3D21-202ENST00000474766 FUT2Q10981 343 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 PNOCQ13519 176 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 SRLQ86TD4 932 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 COA1Q9GZY4 146 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 RRAGCQ9HB90 399 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 CD209Q9NNX6 404 aa23.96■■□□□ 1.43
SH3D21-202ENST00000474766 MYH2Q9UKX2 1941 aa23.95■■□□□ 1.43
SH3D21-202ENST00000474766 PSMD14O00487 310 aa23.95■■□□□ 1.42
SH3D21-202ENST00000474766 MDM2Q00987 491 aaPredicted RBP23.95■■□□□ 1.42
SH3D21-202ENST00000474766 ZNF579Q8NAF0 562 aaKnown RBP23.95■■□□□ 1.42
SH3D21-202ENST00000474766 NSUN4Q96CB9 384 aaKnown RBP23.95■■□□□ 1.42
SH3D21-202ENST00000474766 CCDC34Q96HJ3 373 aa23.95■■□□□ 1.42
SH3D21-202ENST00000474766 L3MBTL3Q96JM7 780 aaPredicted RBP23.95■■□□□ 1.42
SH3D21-202ENST00000474766 BAZ2AQ9UIF9 1905 aaKnown RBP23.95■■□□□ 1.42
SH3D21-202ENST00000474766 SCN4AP35499 1836 aa23.95■■□□□ 1.42
SH3D21-202ENST00000474766 TNNT3P45378 269 aaPredicted RBP23.94■■□□□ 1.42
SH3D21-202ENST00000474766 NR5A1Q13285 461 aa23.94■■□□□ 1.42
SH3D21-202ENST00000474766 PODNQ7Z5L7 613 aa23.94■■□□□ 1.42
SH3D21-202ENST00000474766 FOXP4Q8IVH2 680 aaPredicted RBP23.94■■□□□ 1.42
SH3D21-202ENST00000474766 USP5P45974 858 aa23.94■■□□□ 1.42
SH3D21-202ENST00000474766 ZNF804AQ7Z570 1209 aa23.94■■□□□ 1.42
SH3D21-202ENST00000474766 CNNM3Q8NE01 707 aa23.94■■□□□ 1.42
SH3D21-202ENST00000474766 MYH6P13533 1939 aa23.94■■□□□ 1.42
SH3D21-202ENST00000474766 IL1R1P14778 569 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 PKN1Q16512 942 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 OXER1Q8TDS5 423 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 SHISA4Q96DD7 197 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 CYP2D7A0A087X1C5 515 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 KIF3CO14782 793 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 EPC1Q9H2F5 836 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 RSPH14Q9UHP6 348 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 RAB21Q9UL25 225 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.93■■□□□ 1.421e-6■■□□□ 14.3
SH3D21-202ENST00000474766 PCDHB6Q9Y5E3 794 aa23.93■■□□□ 1.42
SH3D21-202ENST00000474766 PRPF3O43395 683 aaKnown RBP23.92■■□□□ 1.42
SH3D21-202ENST00000474766 LMAN1P49257 510 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 SCNN1DP51172 638 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 MECOMQ03112 1051 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 TROAPQ12815 778 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 TNIP1Q15025 636 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 ISM2Q6H9L7 571 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 TMED8Q6PL24 325 aaPredicted RBP23.92■■□□□ 1.42
SH3D21-202ENST00000474766 LEKR1Q6ZMV7 388 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 HDXQ7Z353 690 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 IQCA1Q86XH1 822 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 INTS13Q9NVM9 706 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 ZBTB12Q9Y330 459 aaPredicted RBP23.92■■□□□ 1.42
SH3D21-202ENST00000474766 PCDHA5Q9Y5H7 936 aa23.92■■□□□ 1.42
SH3D21-202ENST00000474766 SRPRBQ9Y5M8 271 aaKnown RBP23.92■■□□□ 1.42
SH3D21-202ENST00000474766 TMEM232C9JQI7 657 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 H3BQF6 201 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 EIF3JO75822 258 aaKnown RBP23.91■■□□□ 1.42
SH3D21-202ENST00000474766 GRIN1Q05586 938 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 IFIT1BQ5T764 474 aaKnown RBP23.91■■□□□ 1.42
SH3D21-202ENST00000474766 SRGAP1Q7Z6B7 1085 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 CATIPQ7Z7H3 387 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 RBM28Q9NW13 759 aaKnown RBP23.91■■□□□ 1.42
SH3D21-202ENST00000474766 CEP131Q9UPN4 1083 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 RRP15Q9Y3B9 282 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms