RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
EPCAM-205ENST00000474691 PCSK9Q8NBP7 692 aaKnown RBP16.51■□□□□ 0.23
EPCAM-205ENST00000474691 GLT1D1Q96MS3 346 aa16.51■□□□□ 0.23
EPCAM-205ENST00000474691 LAMA3Q16787 3333 aa16.51■□□□□ 0.23
EPCAM-205ENST00000474691 MROH7Q68CQ1 1323 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 TMEM265A0A087WTH1 108 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.5■□□□□ 0.23
EPCAM-205ENST00000474691 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.5■□□□□ 0.23
EPCAM-205ENST00000474691 ZNF865P0CJ78 1059 aaPredicted RBP16.5■□□□□ 0.23
EPCAM-205ENST00000474691 TAL1P17542 331 aaPredicted RBP16.5■□□□□ 0.23
EPCAM-205ENST00000474691 TDO2P48775 406 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 ACLYP53396 1101 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 SYMPKQ92797 1274 aaKnown RBP16.5■□□□□ 0.23
EPCAM-205ENST00000474691 KIFC2Q96AC6 838 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 PUS7LQ9H0K6 701 aaKnown RBP16.5■□□□□ 0.23
EPCAM-205ENST00000474691 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 CLIP2Q9UDT6 1046 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 FBXO40Q9UH90 709 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 ZNF214Q9UL59 606 aaPredicted RBP16.5■□□□□ 0.23
EPCAM-205ENST00000474691 MYH8P13535 1937 aa16.5■□□□□ 0.23
EPCAM-205ENST00000474691 SYNGAP1Q96PV0 1343 aa16.49■□□□□ 0.23
EPCAM-205ENST00000474691 F5H6K3 240 aa16.49■□□□□ 0.23
EPCAM-205ENST00000474691 KIAA0355O15063 1070 aa16.49■□□□□ 0.23
EPCAM-205ENST00000474691 TLR3O15455 904 aaKnown RBP16.49■□□□□ 0.23
EPCAM-205ENST00000474691 C6orf222P0C671 652 aaPredicted RBP16.49■□□□□ 0.23
EPCAM-205ENST00000474691 KLRC3Q07444 240 aa16.49■□□□□ 0.23
EPCAM-205ENST00000474691 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
EPCAM-205ENST00000474691 CCDC129Q6ZRS4 1044 aa16.49■□□□□ 0.23
EPCAM-205ENST00000474691 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
EPCAM-205ENST00000474691 TOX2Q96NM4 488 aa16.49■□□□□ 0.23
EPCAM-205ENST00000474691 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
EPCAM-205ENST00000474691 NYAP2Q9P242 653 aa16.49■□□□□ 0.23
EPCAM-205ENST00000474691 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
EPCAM-205ENST00000474691 GNAT2P19087 354 aa16.48■□□□□ 0.23
EPCAM-205ENST00000474691 KCNA10Q16322 511 aa16.48■□□□□ 0.23
EPCAM-205ENST00000474691 SIRT2Q8IXJ6 389 aa16.48■□□□□ 0.23
EPCAM-205ENST00000474691 LENG1Q96BZ8 264 aaPredicted RBP16.48■□□□□ 0.23
EPCAM-205ENST00000474691 RAVER2Q9HCJ3 691 aaKnown RBP16.48■□□□□ 0.23
EPCAM-205ENST00000474691 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
EPCAM-205ENST00000474691 RLFQ13129 1914 aa16.48■□□□□ 0.23
EPCAM-205ENST00000474691 A0A0G2JMZ2 1700 aa16.48■□□□□ 0.23
EPCAM-205ENST00000474691 SYNRGQ9UMZ2 1314 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 SMIM22K7EJ46 135 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 DUSP11O75319 330 aaKnown RBP16.47■□□□□ 0.23
EPCAM-205ENST00000474691 PPIGQ13427 754 aaKnown RBP eCLIP16.47■□□□□ 0.23
EPCAM-205ENST00000474691 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 GIMAP6Q6P9H5 292 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 MIER1Q8N108 512 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 TMEM199Q8N511 208 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 STRBPQ96SI9 672 aaKnown RBP16.47■□□□□ 0.23
EPCAM-205ENST00000474691 NACAP1Q9BZK3 213 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 ABHD16BQ9H3Z7 469 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 FEM1BQ9UK73 627 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 ROBO3Q96MS0 1386 aa16.47■□□□□ 0.23
EPCAM-205ENST00000474691 COL6A3P12111 3177 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 A0A0U1RQG5 324 aaPredicted RBP16.46■□□□□ 0.23
EPCAM-205ENST00000474691 SMARCA5O60264 1052 aaPredicted RBP16.46■□□□□ 0.23
EPCAM-205ENST00000474691 ADAMTS4O75173 837 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 NDUFB10O96000 172 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 TIMP1P01033 207 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
EPCAM-205ENST00000474691 TSPY3P0CV98 308 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 TSPY8P0CW00 308 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 RASA1P20936 1047 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 ITGB8P26012 769 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 FAAP100Q0VG06 881 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 GNASQ5JWF2 1037 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 ANKRD33Q7Z3H0 272 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
EPCAM-205ENST00000474691 CHST13Q8NET6 341 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 REPS2Q8NFH8 660 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 APPBP2Q92624 585 aa16.46■□□□□ 0.23
EPCAM-205ENST00000474691 GAS2L1Q99501 681 aaPredicted RBP16.46■□□□□ 0.23
EPCAM-205ENST00000474691 TTYH1Q9H313 450 aaPredicted RBP16.46■□□□□ 0.23
EPCAM-205ENST00000474691 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.46■□□□□ 0.23
EPCAM-205ENST00000474691 BAZ2AQ9UIF9 1905 aaKnown RBP16.46■□□□□ 0.23
EPCAM-205ENST00000474691 ELP1O95163 1332 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 LTBP2Q14767 1821 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 SNAI1O95863 264 aaPredicted RBP16.45■□□□□ 0.22
EPCAM-205ENST00000474691 TTLL1O95922 423 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 CHGBP05060 677 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 FDX1P10109 184 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 DNAJB2P25686 324 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 PDE4BQ07343 736 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 MAMDC4Q6UXC1 1216 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 KBTBD3Q8NAB2 608 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 MTIF3Q9H2K0 278 aaKnown RBP16.45■□□□□ 0.22
EPCAM-205ENST00000474691 HOMER2Q9NSB8 354 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 RIPK3Q9Y572 518 aa16.45■□□□□ 0.22
EPCAM-205ENST00000474691 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
EPCAM-205ENST00000474691 ATP2A1O14983 1001 aa16.44■□□□□ 0.22
EPCAM-205ENST00000474691 RNF113AO15541 343 aaKnown RBP16.44■□□□□ 0.22
EPCAM-205ENST00000474691 ZEB2O60315 1214 aa16.44■□□□□ 0.22
EPCAM-205ENST00000474691 PRDM1O75626 825 aa16.44■□□□□ 0.22
EPCAM-205ENST00000474691 ASGR1P07306 291 aa16.44■□□□□ 0.22
EPCAM-205ENST00000474691 CCDC144BQ3MJ40 725 aa16.44■□□□□ 0.22
EPCAM-205ENST00000474691 PPP4R3BQ5MIZ7 849 aa16.44■□□□□ 0.22
EPCAM-205ENST00000474691 DIEXFQ68CQ4 756 aaKnown RBP16.44■□□□□ 0.22
EPCAM-205ENST00000474691 MFSD5Q6N075 450 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms