RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 PNOCQ13519 176 aa24.75■■□□□ 1.55
CCM2-206ENST00000474617 NONOQ15233 471 aaKnown RBP eCLIP24.75■■□□□ 1.55
CCM2-206ENST00000474617 TMEM179Q6ZVK1 233 aa24.75■■□□□ 1.55
CCM2-206ENST00000474617 SYMPKQ92797 1274 aaKnown RBP24.75■■□□□ 1.55
CCM2-206ENST00000474617 AK8Q96MA6 479 aa24.75■■□□□ 1.55
CCM2-206ENST00000474617 CLIP2Q9UDT6 1046 aa24.75■■□□□ 1.55
CCM2-206ENST00000474617 NFIAQ12857 509 aa24.74■■□□□ 1.55
CCM2-206ENST00000474617 SH3RF1Q7Z6J0 888 aa24.74■■□□□ 1.55
CCM2-206ENST00000474617 PIBF1Q8WXW3 757 aa24.74■■□□□ 1.55
CCM2-206ENST00000474617 GSDMAQ96QA5 445 aa24.74■■□□□ 1.55
CCM2-206ENST00000474617 IMPACTQ9P2X3 320 aa24.74■■□□□ 1.55
CCM2-206ENST00000474617 FAM198AQ9UFP1 575 aa24.74■■□□□ 1.55
CCM2-206ENST00000474617 SERTAD1Q9UHV2 236 aa24.74■■□□□ 1.55
CCM2-206ENST00000474617 BAZ2BQ9UIF8 2168 aaKnown RBP24.74■■□□□ 1.55
CCM2-206ENST00000474617 PNMA6FA0A0J9YX94 578 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 SMCO2A6NFE2 343 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 MYL1P05976 194 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 GOLGA8HP0CJ92 632 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 TGFB2P61812 414 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 GRIN1Q05586 938 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 CERKLQ49MI3 558 aaPredicted RBP24.73■■□□□ 1.55
CCM2-206ENST00000474617 FKBP1CQ5VVH2 108 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 TYW1BQ6NUM6 668 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 RSBN1LQ6PCB5 846 aaPredicted RBP24.73■■□□□ 1.55
CCM2-206ENST00000474617 DTHD1Q6ZMT9 781 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 ADAMTSL1Q8N6G6 1762 aa24.73■■□□□ 1.55
CCM2-206ENST00000474617 HERC5Q9UII4 1024 aaKnown RBP24.73■■□□□ 1.55
CCM2-206ENST00000474617 VWA3AA6NCI4 1184 aa24.72■■□□□ 1.55
CCM2-206ENST00000474617 CBFA2T2O43439 604 aa24.72■■□□□ 1.55
CCM2-206ENST00000474617 C21orf2O43822 256 aa24.72■■□□□ 1.55
CCM2-206ENST00000474617 MCM7P33993 719 aa24.72■■□□□ 1.55
CCM2-206ENST00000474617 MCTP2Q6DN12 878 aa24.72■■□□□ 1.55
CCM2-206ENST00000474617 REXO1Q8N1G1 1221 aaKnown RBP24.72■■□□□ 1.55
CCM2-206ENST00000474617 C4orf32Q8N8J7 132 aa24.72■■□□□ 1.55
CCM2-206ENST00000474617 MAGEF1Q9HAY2 307 aa24.72■■□□□ 1.55
CCM2-206ENST00000474617 KCNQ5Q9NR82 932 aa24.72■■□□□ 1.55
CCM2-206ENST00000474617 OFD1O75665 1012 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 VIL1P09327 827 aaKnown RBP24.71■■□□□ 1.55
CCM2-206ENST00000474617 VEGFAP15692 232 aaPredicted RBP24.71■■□□□ 1.55
CCM2-206ENST00000474617 ERCC5P28715 1186 aaPredicted RBP24.71■■□□□ 1.55
CCM2-206ENST00000474617 GSDMDP57764 484 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 MORC3Q14149 939 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 CFAP100Q494V2 611 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 NAP1L4Q99733 375 aaKnown RBP24.71■■□□□ 1.55
CCM2-206ENST00000474617 BIN1O00499 593 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 MPHOSPH10O00566 681 aaKnown RBP24.71■■□□□ 1.55
CCM2-206ENST00000474617 SPECC1Q5M775 1068 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 OGFOD1Q8N543 542 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 ERCC4Q92889 916 aaPredicted RBP24.71■■□□□ 1.55
CCM2-206ENST00000474617 MTMR8Q96EF0 704 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 PIGSQ96S52 555 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 GTPBP4Q9BZE4 634 aaKnown RBP24.71■■□□□ 1.55
CCM2-206ENST00000474617 CUEDC2Q9H467 287 aa24.71■■□□□ 1.55
CCM2-206ENST00000474617 ADCY7P51828 1080 aa24.7■■□□□ 1.54
CCM2-206ENST00000474617 NCAPHQ15003 741 aa24.7■■□□□ 1.54
CCM2-206ENST00000474617 NEK8Q86SG6 692 aa24.7■■□□□ 1.54
CCM2-206ENST00000474617 ZSCAN29Q8IWY8 852 aaPredicted RBP24.7■■□□□ 1.54
CCM2-206ENST00000474617 LRRC47Q8N1G4 583 aaKnown RBP24.7■■□□□ 1.54
CCM2-206ENST00000474617 MTMR14Q8NCE2 650 aa24.7■■□□□ 1.54
CCM2-206ENST00000474617 GMCL1P1Q8NEA9 526 aa24.7■■□□□ 1.54
CCM2-206ENST00000474617 AGBL3Q8NEM8 1001 aa24.7■■□□□ 1.54
CCM2-206ENST00000474617 ZNF219Q9P2Y4 722 aaPredicted RBP24.7■■□□□ 1.54
CCM2-206ENST00000474617 MAN1B1Q9UKM7 699 aa24.7■■□□□ 1.54
CCM2-206ENST00000474617 MTMR7Q9Y216 660 aa24.7■■□□□ 1.54
CCM2-206ENST00000474617 SIPA1L1O43166 1804 aa24.69■■□□□ 1.54
CCM2-206ENST00000474617 HOMER1Q86YM7 354 aa24.69■■□□□ 1.54
CCM2-206ENST00000474617 LARGE2Q8N3Y3 721 aa24.69■■□□□ 1.54
CCM2-206ENST00000474617 DHX58Q96C10 678 aa24.69■■□□□ 1.54
CCM2-206ENST00000474617 EPSTI1Q96J88 318 aa24.69■■□□□ 1.54
CCM2-206ENST00000474617 CCSER1Q9C0I3 900 aa24.69■■□□□ 1.54
CCM2-206ENST00000474617 RMND1Q9NWS8 449 aa24.69■■□□□ 1.54
CCM2-206ENST00000474617 MYH4Q9Y623 1939 aa24.68■■□□□ 1.54
CCM2-206ENST00000474617 YDJCA8MPS7 323 aa24.68■■□□□ 1.54
CCM2-206ENST00000474617 TERF1P54274 439 aa24.68■■□□□ 1.54
CCM2-206ENST00000474617 TRAF1Q13077 416 aa24.68■■□□□ 1.54
CCM2-206ENST00000474617 SPC24Q8NBT2 197 aa24.68■■□□□ 1.54
CCM2-206ENST00000474617 ENOX1Q8TC92 643 aaKnown RBP24.68■■□□□ 1.54
CCM2-206ENST00000474617 PAGE5Q96GU1 130 aa24.68■■□□□ 1.54
CCM2-206ENST00000474617 ZBTB5O15062 677 aa24.67■■□□□ 1.54
CCM2-206ENST00000474617 MRPL12P52815 198 aaKnown RBP24.67■■□□□ 1.54
CCM2-206ENST00000474617 E2F4Q16254 413 aa24.67■■□□□ 1.54
CCM2-206ENST00000474617 NOM1Q5C9Z4 860 aaKnown RBP24.67■■□□□ 1.54
CCM2-206ENST00000474617 PDILTQ8N807 584 aa24.67■■□□□ 1.54
CCM2-206ENST00000474617 GMCL1Q96IK5 515 aa24.67■■□□□ 1.54
CCM2-206ENST00000474617 GMLQ99445 158 aa24.67■■□□□ 1.54
CCM2-206ENST00000474617 DNAJC18Q9H819 358 aa24.67■■□□□ 1.54
CCM2-206ENST00000474617 RIC8AQ9NPQ8 531 aa24.67■■□□□ 1.54
CCM2-206ENST00000474617 DDTLA6NHG4 134 aaPredicted RBP24.66■■□□□ 1.54
CCM2-206ENST00000474617 SPDYE2BA6NHP3 402 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 WNT7AO00755 349 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 SPDYE6P0CI01 402 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 INF2Q27J81 1249 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 ABCB5Q2M3G0 1257 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 USP49Q70CQ1 688 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 SPTLC3Q9NUV7 552 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 ZNRF3Q9ULT6 936 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 FRMPD2Q68DX3 1309 aaPredicted RBP24.66■■□□□ 1.54
CCM2-206ENST00000474617 GTPBP6O43824 516 aaPredicted RBP24.66■■□□□ 1.54
CCM2-206ENST00000474617 OR52Z1P0C646 297 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 KCNA3P22001 575 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms