RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SRBD1Q8N5C6 995 aaKnown RBP11.95□□□□□ -0.5
COL12A1-206ENST00000474564 ZNF784Q8NCA9 323 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-206ENST00000474564 PHKBQ93100 1093 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 CLMNQ96JQ2 1002 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 SLF1Q9BQI6 1058 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 UBA5Q9GZZ9 404 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 GLT8D2Q9H1C3 349 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 RPAP3Q9H6T3 665 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-206ENST00000474564 FAM217BQ9NTX9 383 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-206ENST00000474564 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 PNMA6FA0A0J9YX94 578 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
COL12A1-206ENST00000474564 JAK2O60674 1132 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 PLEKHA8P1O95397 391 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 SCG2P13521 617 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 INHBEP58166 350 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 COG2Q14746 738 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 NTRK3Q16288 839 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 CST9Q5W186 159 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 RGMBQ6NW40 437 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 PAXIP1Q6ZW49 1069 aaPredicted RBP11.94□□□□□ -0.5
COL12A1-206ENST00000474564 CCDC84Q86UT8 332 aaPredicted RBP11.94□□□□□ -0.5
COL12A1-206ENST00000474564 HOMER1Q86YM7 354 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 ADGRF4Q8IZF3 695 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 CMTR1Q8N1G2 835 aaKnown RBP11.94□□□□□ -0.5
COL12A1-206ENST00000474564 BICD2Q8TD16 824 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 KIFC2Q96AC6 838 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 WNK4Q96J92 1243 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 RIOX1Q9H6W3 641 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 SH3GLB2Q9NR46 395 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
COL12A1-206ENST00000474564 DOCK1Q14185 1865 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 PASKQ96RG2 1323 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 A0A0G2JLL6 359 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-206ENST00000474564 MANSC4A6NHS7 340 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-206ENST00000474564 IRF6O14896 467 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 ZBTB5O15062 677 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 STX6O43752 255 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 VCAM1P19320 739 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 GNA11P29992 359 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 SLC16A2P36021 539 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 NLRP5P59047 1200 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-206ENST00000474564 MCTP2Q6DN12 878 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 HEATR3Q7Z4Q2 680 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 PRRT2Q7Z6L0 340 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-206ENST00000474564 GTF3C2Q8WUA4 911 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-206ENST00000474564 HHIPL1Q96JK4 782 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-206ENST00000474564 AMNQ9BXJ7 453 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 C6orf50Q9HD87 102 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-206ENST00000474564 KCNH4Q9UQ05 1017 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 TLL2Q9Y6L7 1015 aa11.93□□□□□ -0.5
COL12A1-206ENST00000474564 MYPNQ86TC9 1320 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 MYH6P13533 1939 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 SYT1P21579 422 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 MRPL12P52815 198 aaKnown RBP11.92□□□□□ -0.5
COL12A1-206ENST00000474564 NAPAP54920 295 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 FMR1Q06787 632 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL12A1-206ENST00000474564 NBR1Q14596 966 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 MCTP1Q6DN14 999 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 TTBK2Q6IQ55 1244 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 NBPF11Q86T75 865 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 SAPCD2Q86UD0 394 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 FBXO11Q86XK2 927 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 TEX2Q8IWB9 1127 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
COL12A1-206ENST00000474564 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 PIGSQ96S52 555 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 ZSCAN16Q9H4T2 348 aaPredicted RBP11.92□□□□□ -0.5
COL12A1-206ENST00000474564 JMJD4Q9H9V9 463 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 PRR12Q9ULL5 1215 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 AGTPBP1Q9UPW5 1226 aa11.92□□□□□ -0.5
COL12A1-206ENST00000474564 GREB1LQ9C091 1923 aaPredicted RBP11.92□□□□□ -0.5
COL12A1-206ENST00000474564 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 HOXA7P31268 230 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-206ENST00000474564 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 CDC37Q16543 378 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-206ENST00000474564 CCL15Q16663 113 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 PPP1R18Q6NYC8 613 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 CATSPERGQ6ZRH7 1159 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 FBXO18Q8NFZ0 1043 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 CUL5Q93034 780 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 PPP1R9AQ9ULJ8 1098 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 SLC45A1Q9Y2W3 748 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 MRPL11Q9Y3B7 192 aaKnown RBP11.91□□□□□ -0.5
COL12A1-206ENST00000474564 MYH4Q9Y623 1939 aa11.91□□□□□ -0.5
COL12A1-206ENST00000474564 ATAD5Q96QE3 1844 aa11.9□□□□□ -0.5
COL12A1-206ENST00000474564 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
COL12A1-206ENST00000474564 PPFIA3O75145 1194 aa11.9□□□□□ -0.5
COL12A1-206ENST00000474564 ZSCAN22P10073 491 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-206ENST00000474564 FDPSP14324 419 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms