RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 MCTP1Q6DN14 999 aa23.51■■□□□ 1.35
CDHR3-210ENST00000474330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.51■■□□□ 1.35
CDHR3-210ENST00000474330 UBA5Q9GZZ9 404 aa23.51■■□□□ 1.35
CDHR3-210ENST00000474330 GOPCQ9HD26 462 aa23.51■■□□□ 1.35
CDHR3-210ENST00000474330 GPCPD1Q9NPB8 672 aa23.51■■□□□ 1.35
CDHR3-210ENST00000474330 IREB2P48200 963 aaKnown RBP23.51■■□□□ 1.35
CDHR3-210ENST00000474330 CPVLQ9H3G5 476 aa23.51■■□□□ 1.35
CDHR3-210ENST00000474330 PHIPQ8WWQ0 1821 aa23.5■■□□□ 1.35
CDHR3-210ENST00000474330 MYH15Q9Y2K3 1946 aa23.5■■□□□ 1.35
CDHR3-210ENST00000474330 RAD21O60216 631 aa23.5■■□□□ 1.35
CDHR3-210ENST00000474330 MMP1P03956 469 aa23.5■■□□□ 1.35
CDHR3-210ENST00000474330 FOXD4L6Q3SYB3 417 aaPredicted RBP23.5■■□□□ 1.35
CDHR3-210ENST00000474330 FOXD4L3Q6VB84 417 aaPredicted RBP23.5■■□□□ 1.35
CDHR3-210ENST00000474330 KCTD1Q719H9 257 aa23.5■■□□□ 1.35
CDHR3-210ENST00000474330 RRP36Q96EU6 259 aaKnown RBP23.5■■□□□ 1.35
CDHR3-210ENST00000474330 CHAMP1Q96JM3 812 aa23.5■■□□□ 1.35
CDHR3-210ENST00000474330 VCPKMTQ9H867 229 aa23.5■■□□□ 1.35
CDHR3-210ENST00000474330 GOLGA6L22H0YM25 854 aa23.49■■□□□ 1.35
CDHR3-210ENST00000474330 CTCFP49711 727 aaPredicted RBP23.49■■□□□ 1.35
CDHR3-210ENST00000474330 TTBK2Q6IQ55 1244 aa23.49■■□□□ 1.35
CDHR3-210ENST00000474330 ZKSCAN4Q969J2 545 aaPredicted RBP23.49■■□□□ 1.35
CDHR3-210ENST00000474330 CLMNQ96JQ2 1002 aa23.49■■□□□ 1.35
CDHR3-210ENST00000474330 VPS54Q9P1Q0 977 aa23.49■■□□□ 1.35
CDHR3-210ENST00000474330 DDX11L8A8MPP1 907 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 HSPA8P11142 646 aaKnown RBP23.48■■□□□ 1.35
CDHR3-210ENST00000474330 BMP3P12645 472 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 NOL9Q5SY16 702 aaKnown RBP23.48■■□□□ 1.35
CDHR3-210ENST00000474330 CCDC84Q86UT8 332 aaPredicted RBP23.48■■□□□ 1.35
CDHR3-210ENST00000474330 PIBF1Q8WXW3 757 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 SHISA4Q96DD7 197 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 PHF20Q9BVI0 1012 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 SH3GLB2Q9NR46 395 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 KCNJ14Q9UNX9 436 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 LBX1P52954 281 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 MAP3K9P80192 1104 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 DNM1Q05193 864 aaKnown RBP23.48■■□□□ 1.35
CDHR3-210ENST00000474330 SAFBQ15424 915 aaKnown RBP eCLIP23.48■■□□□ 1.35
CDHR3-210ENST00000474330 FAM173BQ6P4H8 233 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 BRAPQ7Z569 592 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 VAT1LQ9HCJ6 419 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 PICK1Q9NRD5 415 aa23.48■■□□□ 1.35
CDHR3-210ENST00000474330 U2AF2P26368 475 aaKnown RBP eCLIP23.47■■□□□ 1.35
CDHR3-210ENST00000474330 ADGRF4Q8IZF3 695 aa23.47■■□□□ 1.35
CDHR3-210ENST00000474330 FAM177A1Q8N128 213 aaPredicted RBP23.47■■□□□ 1.35
CDHR3-210ENST00000474330 PIGSQ96S52 555 aa23.47■■□□□ 1.35
CDHR3-210ENST00000474330 WDR18Q9BV38 432 aa23.47■■□□□ 1.35
CDHR3-210ENST00000474330 KIAA1683Q9H0B3 1180 aa23.47■■□□□ 1.35
CDHR3-210ENST00000474330 JMJD4Q9H9V9 463 aa23.47■■□□□ 1.35
CDHR3-210ENST00000474330 SEC63Q9UGP8 760 aaKnown RBP23.47■■□□□ 1.35
CDHR3-210ENST00000474330 CSADQ9Y600 493 aa23.47■■□□□ 1.35
CDHR3-210ENST00000474330 PTPRAP18433 802 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 SLC16A2P36021 539 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 VGLL4Q14135 290 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 KIAA1755Q5JYT7 1200 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 BTNL9Q6UXG8 535 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.46■■□□□ 1.35
CDHR3-210ENST00000474330 ANKRD13AQ8IZ07 590 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 MTMR8Q96EF0 704 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 NUP88Q99567 741 aaPredicted RBP23.46■■□□□ 1.35
CDHR3-210ENST00000474330 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 AS3MTQ9HBK9 375 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 TSKSQ9UJT2 592 aa23.46■■□□□ 1.35
CDHR3-210ENST00000474330 UNCXA6NJT0 531 aa23.45■■□□□ 1.34
CDHR3-210ENST00000474330 KIF28PB7ZC32 967 aa23.45■■□□□ 1.34
CDHR3-210ENST00000474330 HOMER1Q86YM7 354 aa23.45■■□□□ 1.34
CDHR3-210ENST00000474330 DIS3L2Q8IYB7 885 aaKnown RBP23.45■■□□□ 1.34
CDHR3-210ENST00000474330 SPICE1Q8N0Z3 855 aa23.45■■□□□ 1.34
CDHR3-210ENST00000474330 FEZ1Q99689 392 aa23.45■■□□□ 1.34
CDHR3-210ENST00000474330 FOXP1Q9H334 677 aaPredicted RBP23.45■■□□□ 1.34
CDHR3-210ENST00000474330 BARHL2Q9NY43 387 aa23.45■■□□□ 1.34
CDHR3-210ENST00000474330 ISY1Q9ULR0 285 aaKnown RBP23.45■■□□□ 1.34
CDHR3-210ENST00000474330 hCG_1984214I3L0E3 225 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 PTMSP20962 102 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 KRT85P78386 507 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 MKRN3Q13064 507 aaKnown RBP23.44■■□□□ 1.34
CDHR3-210ENST00000474330 SPRYD7Q5W111 196 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 WWC2Q6AWC2 1192 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 ATL3Q6DD88 541 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 ZNF713Q8N859 430 aaPredicted RBP23.44■■□□□ 1.34
CDHR3-210ENST00000474330 SLC10A4Q96EP9 437 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 PRDM10Q9NQV6 1147 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 CNPY2Q9Y2B0 182 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 PNMA6FA0A0J9YX94 578 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 BTBD18B2RXH4 712 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 USP17L10C9JJH3 530 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 TMEM232C9JQI7 657 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 GNL2Q13823 731 aaKnown RBP23.44■■□□□ 1.34
CDHR3-210ENST00000474330 LPAR1Q92633 364 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 GPKOWQ92917 476 aaPredicted RBP eCLIP23.44■■□□□ 1.34
CDHR3-210ENST00000474330 SNCAIPQ9Y6H5 919 aa23.44■■□□□ 1.34
CDHR3-210ENST00000474330 PTPRFP10586 1907 aa23.43■■□□□ 1.34
CDHR3-210ENST00000474330 STXBP3O00186 592 aa23.43■■□□□ 1.34
CDHR3-210ENST00000474330 PLA2G6O60733 806 aa23.43■■□□□ 1.34
CDHR3-210ENST00000474330 NLRP5P59047 1200 aa23.43■■□□□ 1.34
CDHR3-210ENST00000474330 NBR1Q14596 966 aa23.43■■□□□ 1.34
CDHR3-210ENST00000474330 ZYXQ15942 572 aaKnown RBP23.43■■□□□ 1.34
CDHR3-210ENST00000474330 HEATR3Q7Z4Q2 680 aa23.43■■□□□ 1.34
CDHR3-210ENST00000474330 ZNF280CQ8ND82 737 aa23.43■■□□□ 1.34
CDHR3-210ENST00000474330 CCDC148Q8NFR7 591 aa23.43■■□□□ 1.34
CDHR3-210ENST00000474330 ZBTB5O15062 677 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms