RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ANKRD18AQ8IVF6 992 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 NACC2Q96BF6 587 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 TUT1Q9H6E5 874 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 DBNDD1Q9H9R9 158 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 PLEKHA5Q9HAU0 1116 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 IRAK4Q9NWZ3 460 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 QPCTLQ9NXS2 382 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 PNMA8BQ9ULN7 279 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 PCDHB15Q9Y5E8 787 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 SQORQ9Y6N5 450 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 KANK1Q14678 1352 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 PRXQ9BXM0 1461 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 STXBP3O00186 592 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 SPTLC1O15269 473 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 PRMT3O60678 531 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 P4HBP07237 508 aaKnown RBP6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 CFHP08603 1231 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 ITGB8P26012 769 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 SLC4A3P48751 1232 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 STK3Q13188 491 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 LAMC2Q13753 1193 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 QPCTQ16769 361 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 INF2Q27J81 1249 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 DACT2Q5SW24 774 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 AP1ARQ63HQ0 302 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 FAAH2Q6GMR7 532 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 MZT2BQ6NZ67 158 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 MZT2AQ6P582 158 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 LARP1Q6PKG0 1096 aaKnown RBP6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 TRIM74Q86UV6 250 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 TRIM73Q86UV7 250 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 RGL4Q8IZJ4 473 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 CLP1Q92989 425 aaKnown RBP6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 ATP6V1E2Q96A05 226 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 BAG1Q99933 345 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 DEF6Q9H4E7 631 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 EGFL7Q9UHF1 273 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 PA2G4Q9UQ80 394 aaKnown RBP6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 ATP6V0A2Q9Y487 856 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 MAGED1Q9Y5V3 778 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 KDM6AO15550 1401 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 COL18A1P39060 1754 aa6.96□□□□□ -1.3
SMARCE1-208ENST00000474246 METP08581 1390 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 HSPA5P11021 654 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 ATP2B4P23634 1241 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 HPDP32754 393 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 PRR7Q8TB68 274 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 USP6NLQ92738 828 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 CEP95Q96GE4 821 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 HHIPL1Q96JK4 782 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 NUDT12Q9BQG2 462 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 TCHPQ9BT92 498 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 KCTD5Q9NXV2 234 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 FBXO10Q9UK96 956 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 IPPQ9Y573 584 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 TLL2Q9Y6L7 1015 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 ITGAEP38570 1179 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 MCL1Q07820 350 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 FUT2Q10981 343 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 CFAP58Q5T655 872 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 HIBCHQ6NVY1 386 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 LVRNQ6Q4G3 990 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 PNMA8AQ86V59 439 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 TBC1D22AQ8WUA7 517 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 SNX21Q969T3 373 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 HVCN1Q96D96 273 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 TRIM11Q96F44 468 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 SLC39A3Q9BRY0 314 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 UNC45AQ9H3U1 944 aa6.95□□□□□ -1.3
SMARCE1-208ENST00000474246 A0A0G2JLW4 131 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 GOLGA8CPA6NN73 597 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 F8VZ95 297 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 SKAP2O75563 359 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 INMTO95050 263 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 ABL1P00519 1130 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 VARSP26640 1264 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 HSPA4P34932 840 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 STT3AP46977 705 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 ST13P50502 369 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 TPD52P55327 224 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 HSD17B7P56937 341 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 NSUN2Q08J23 767 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 NOGQ13253 232 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 RILPL1Q5EBL4 403 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 PLBD1Q6P4A8 553 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 Q7L0L9 218 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 GLYCTKQ8IVS8 523 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 GSDMBQ8TAX9 411 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 BRSK1Q8TDC3 778 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 RSAD2Q8WXG1 361 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 THAP11Q96EK4 314 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 MOGAT1Q96PD6 335 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 NOL10Q9BSC4 688 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 MRPL9Q9BYD2 267 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 KANSL2Q9H9L4 492 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 CYP4F11Q9HBI6 524 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 VEZTQ9HBM0 779 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 ANO2Q9NQ90 1003 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms