RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 VWCEQ96DN2 955 aa6.81□□□□□ -1.32
UFD1-207ENST00000474226 ATG4CQ96DT6 458 aa6.81□□□□□ -1.32
UFD1-207ENST00000474226 EAF1Q96JC9 268 aaPredicted RBP6.81□□□□□ -1.32
UFD1-207ENST00000474226 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.81□□□□□ -1.32
UFD1-207ENST00000474226 ASCC2Q9H1I8 757 aaPredicted RBP6.81□□□□□ -1.32
UFD1-207ENST00000474226 CNNM2Q9H8M5 875 aa6.81□□□□□ -1.32
UFD1-207ENST00000474226 METTL5Q9NRN9 209 aaKnown RBP6.81□□□□□ -1.32
UFD1-207ENST00000474226 PCDHA11Q9Y5I1 949 aa6.81□□□□□ -1.32
UFD1-207ENST00000474226 MED1Q15648 1581 aaPredicted RBP6.81□□□□□ -1.32
UFD1-207ENST00000474226 UHRF1BP1LA0JNW5 1464 aa6.8□□□□□ -1.32
UFD1-207ENST00000474226 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
UFD1-207ENST00000474226 MLANAQ16655 118 aa6.8□□□□□ -1.32
UFD1-207ENST00000474226 MPZL3Q6UWV2 235 aa6.8□□□□□ -1.32
UFD1-207ENST00000474226 NLRC3Q7RTR2 1065 aa6.8□□□□□ -1.32
UFD1-207ENST00000474226 LIN37Q96GY3 246 aaPredicted RBP6.8□□□□□ -1.32
UFD1-207ENST00000474226 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.8□□□□□ -1.32
UFD1-207ENST00000474226 ADCY10Q96PN6 1610 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 TCOF1Q13428 1488 aaKnown RBP6.79□□□□□ -1.32
UFD1-207ENST00000474226 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.79□□□□□ -1.32
UFD1-207ENST00000474226 ERVFC1P60507 584 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 RAD51AP2Q09MP3 1159 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 LRRFIP1Q32MZ4 808 aaKnown RBP6.79□□□□□ -1.32
UFD1-207ENST00000474226 ZNF394Q53GI3 561 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 ABHD4Q8TB40 342 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 RNF34Q969K3 372 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 SYTL4Q96C24 671 aaPredicted RBP6.79□□□□□ -1.32
UFD1-207ENST00000474226 ANTXR1Q9H6X2 564 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 PCDHGB7Q9Y5F8 929 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 KDM5BQ9UGL1 1544 aa6.79□□□□□ -1.32
UFD1-207ENST00000474226 GPATCH8Q9UKJ3 1502 aaKnown RBP6.79□□□□□ -1.32
UFD1-207ENST00000474226 CLEC3AO75596 197 aa6.78□□□□□ -1.32
UFD1-207ENST00000474226 CCNFP41002 786 aa6.78□□□□□ -1.32
UFD1-207ENST00000474226 NMIQ13287 307 aaPredicted RBP6.78□□□□□ -1.32
UFD1-207ENST00000474226 NBPF12Q5TAG4 269 aaPredicted RBP6.78□□□□□ -1.32
UFD1-207ENST00000474226 KSR1Q8IVT5 923 aa6.78□□□□□ -1.32
UFD1-207ENST00000474226 MYLIPQ8WY64 445 aa6.78□□□□□ -1.32
UFD1-207ENST00000474226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.78□□□□□ -1.32
UFD1-207ENST00000474226 SUPT6HQ7KZ85 1726 aaKnown RBP6.78□□□□□ -1.32
UFD1-207ENST00000474226 PLEKHD1A6NEE1 506 aa6.77□□□□□ -1.33
UFD1-207ENST00000474226 MEIS3P2A8K0S8 358 aa6.77□□□□□ -1.33
UFD1-207ENST00000474226 HPXP02790 462 aa6.77□□□□□ -1.33
UFD1-207ENST00000474226 NME1P15531 152 aaKnown RBP6.77□□□□□ -1.33
UFD1-207ENST00000474226 PKN1Q16512 942 aa6.77□□□□□ -1.33
UFD1-207ENST00000474226 ENOX1Q8TC92 643 aaKnown RBP6.77□□□□□ -1.33
UFD1-207ENST00000474226 DHX38Q92620 1227 aaKnown RBP6.77□□□□□ -1.33
UFD1-207ENST00000474226 SLC38A3Q99624 504 aa6.77□□□□□ -1.33
UFD1-207ENST00000474226 MIA2Q96PC5 1412 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 RECKO95980 971 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 ZGLP1P0C6A0 271 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 VAMP1P23763 118 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 NBPF9Q3BBW0 867 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 OXR1Q8N573 874 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 PDZD8Q8NEN9 1154 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 SYTL5Q8TDW5 730 aaPredicted RBP6.76□□□□□ -1.33
UFD1-207ENST00000474226 ZNF512BQ96KM6 892 aaPredicted RBP6.76□□□□□ -1.33
UFD1-207ENST00000474226 FAM84AQ96KN4 292 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 HDAC8Q9BY41 377 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 CDK11AQ9UQ88 783 aaPredicted RBP6.76□□□□□ -1.33
UFD1-207ENST00000474226 DHX57Q6P158 1386 aaKnown RBP6.76□□□□□ -1.33
UFD1-207ENST00000474226 RAB3GAP2Q9H2M9 1393 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 PTPN23Q9H3S7 1636 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 ABCC5O15440 1437 aa6.76□□□□□ -1.33
UFD1-207ENST00000474226 TNFRSF10CO14798 259 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 SCAMP3O14828 347 aaKnown RBP6.75□□□□□ -1.33
UFD1-207ENST00000474226 TRHRP34981 398 aaPredicted RBP6.75□□□□□ -1.33
UFD1-207ENST00000474226 TEKQ02763 1124 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 MESP2Q0VG99 397 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 ZNF124Q15973 351 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 PRR23BQ6ZRT6 265 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 TMC3Q7Z5M5 1100 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 DAGLBQ8NCG7 672 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 SLC6A18Q96N87 628 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 MKRN2Q9H000 416 aaKnown RBP6.75□□□□□ -1.33
UFD1-207ENST00000474226 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
UFD1-207ENST00000474226 ZNRF3Q9ULT6 936 aa6.75□□□□□ -1.33
UFD1-207ENST00000474226 ADAMTSL3P82987 1691 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 TTC37Q6PGP7 1564 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 FITM1A5D6W6 292 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 IMPDH2P12268 514 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 RACK1P63244 317 aaKnown RBP6.74□□□□□ -1.33
UFD1-207ENST00000474226 DUSP4Q13115 394 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 SNW1Q13573 536 aaKnown RBP6.74□□□□□ -1.33
UFD1-207ENST00000474226 RNF111Q6ZNA4 994 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 TMEM192Q8IY95 271 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 ZNF655Q8N720 491 aaPredicted RBP6.74□□□□□ -1.33
UFD1-207ENST00000474226 FERD3LQ96RJ6 166 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 DIRC2Q96SL1 478 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 SLC9A7Q96T83 725 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 C19orf44Q9H6X5 657 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 ZCCHC11Q5TAX3 1644 aaKnown RBP6.74□□□□□ -1.33
UFD1-207ENST00000474226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.74□□□□□ -1.33
UFD1-207ENST00000474226 DAPK1P53355 1430 aa6.74□□□□□ -1.33
UFD1-207ENST00000474226 CAMSAP2Q08AD1 1489 aa6.73□□□□□ -1.33
UFD1-207ENST00000474226 SSU72P8A0A1W2PR75 194 aa6.73□□□□□ -1.33
UFD1-207ENST00000474226 FBXW10Q5XX13 1052 aa6.73□□□□□ -1.33
UFD1-207ENST00000474226 SPPL2CQ8IUH8 684 aa6.73□□□□□ -1.33
UFD1-207ENST00000474226 LILRA2Q8N149 483 aa6.73□□□□□ -1.33
UFD1-207ENST00000474226 USHBP1Q8N6Y0 703 aa6.73□□□□□ -1.33
UFD1-207ENST00000474226 TCTN2Q96GX1 697 aa6.73□□□□□ -1.33
UFD1-207ENST00000474226 FOXP3Q9BZS1 431 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms