RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 PRAMEF19Q5SWL8 479 aa23.58■■□□□ 1.37
TMEM54-204ENST00000474144 RASGRP2Q7LDG7 609 aa23.58■■□□□ 1.37
TMEM54-204ENST00000474144 MAML3Q96JK9 1138 aa23.58■■□□□ 1.37
TMEM54-204ENST00000474144 DDX20Q9UHI6 824 aaKnown RBP23.58■■□□□ 1.37
TMEM54-204ENST00000474144 FEM1BQ9UK73 627 aa23.58■■□□□ 1.37
TMEM54-204ENST00000474144 PFASO15067 1338 aa23.58■■□□□ 1.36
TMEM54-204ENST00000474144 ORC4O43929 436 aa23.57■■□□□ 1.36
TMEM54-204ENST00000474144 FGRP09769 529 aa23.57■■□□□ 1.36
TMEM54-204ENST00000474144 BMP3P12645 472 aa23.57■■□□□ 1.36
TMEM54-204ENST00000474144 SLC4A3P48751 1232 aa23.57■■□□□ 1.36
TMEM54-204ENST00000474144 SNRNP48Q6IEG0 339 aaKnown RBP23.57■■□□□ 1.36
TMEM54-204ENST00000474144 CWC27Q6UX04 472 aaKnown RBP23.57■■□□□ 1.36
TMEM54-204ENST00000474144 CHRDL2Q6WN34 429 aa23.57■■□□□ 1.36
TMEM54-204ENST00000474144 CPXCR1Q8N123 301 aa23.57■■□□□ 1.36
TMEM54-204ENST00000474144 RAVER2Q9HCJ3 691 aaKnown RBP23.57■■□□□ 1.36
TMEM54-204ENST00000474144 TOMM22Q9NS69 142 aa23.57■■□□□ 1.36
TMEM54-204ENST00000474144 STX8Q9UNK0 236 aa23.57■■□□□ 1.36
TMEM54-204ENST00000474144 MCCP23508 829 aa23.56■■□□□ 1.36
TMEM54-204ENST00000474144 KCTD2Q14681 263 aa23.56■■□□□ 1.36
TMEM54-204ENST00000474144 RRP12Q5JTH9 1297 aaKnown RBP23.56■■□□□ 1.36
TMEM54-204ENST00000474144 TEX13BQ9BXU2 312 aa23.56■■□□□ 1.36
TMEM54-204ENST00000474144 SLC38A10Q9HBR0 1119 aa23.56■■□□□ 1.36
TMEM54-204ENST00000474144 SLC5A4Q9NY91 659 aa23.56■■□□□ 1.36
TMEM54-204ENST00000474144 ISY1Q9ULR0 285 aaKnown RBP23.56■■□□□ 1.36
TMEM54-204ENST00000474144 NR2E3Q9Y5X4 410 aa23.56■■□□□ 1.36
TMEM54-204ENST00000474144 PLXNA1Q9UIW2 1896 aa23.56■■□□□ 1.36
TMEM54-204ENST00000474144 TMEM232C9JQI7 657 aa23.55■■□□□ 1.36
TMEM54-204ENST00000474144 ZBED4O75132 1171 aa23.55■■□□□ 1.36
TMEM54-204ENST00000474144 ZNF792Q3KQV3 632 aa23.55■■□□□ 1.36
TMEM54-204ENST00000474144 ANO1Q5XXA6 986 aa23.55■■□□□ 1.36
TMEM54-204ENST00000474144 ZMYM6O95789 1325 aa23.55■■□□□ 1.36
TMEM54-204ENST00000474144 COL6A1P12109 1028 aa23.54■■□□□ 1.36
TMEM54-204ENST00000474144 COPB2P35606 906 aa23.54■■□□□ 1.36
TMEM54-204ENST00000474144 SLC1A4P43007 532 aa23.54■■□□□ 1.36
TMEM54-204ENST00000474144 NOVP48745 357 aa23.54■■□□□ 1.36
TMEM54-204ENST00000474144 TBC1D10CQ8IV04 446 aa23.54■■□□□ 1.36
TMEM54-204ENST00000474144 GMCL1Q96IK5 515 aa23.54■■□□□ 1.36
TMEM54-204ENST00000474144 MTMR7Q9Y216 660 aa23.54■■□□□ 1.36
TMEM54-204ENST00000474144 CTDP1Q9Y5B0 961 aaPredicted RBP23.54■■□□□ 1.36
TMEM54-204ENST00000474144 ATP2A1O14983 1001 aa23.53■■□□□ 1.36
TMEM54-204ENST00000474144 KCTD1Q719H9 257 aa23.53■■□□□ 1.36
TMEM54-204ENST00000474144 C7orf61Q8IZ16 206 aa23.53■■□□□ 1.36
TMEM54-204ENST00000474144 DIAPH3Q9NSV4 1193 aa23.53■■□□□ 1.36
TMEM54-204ENST00000474144 STAT2P52630 851 aa23.52■■□□□ 1.36
TMEM54-204ENST00000474144 PPP4R3BQ5MIZ7 849 aa23.52■■□□□ 1.36
TMEM54-204ENST00000474144 STAG1Q8WVM7 1258 aa23.52■■□□□ 1.36
TMEM54-204ENST00000474144 RBM27Q9P2N5 1060 aaKnown RBP23.52■■□□□ 1.36
TMEM54-204ENST00000474144 MSCO60682 206 aa23.51■■□□□ 1.35
TMEM54-204ENST00000474144 GSPT1P15170 499 aaKnown RBP23.51■■□□□ 1.35
TMEM54-204ENST00000474144 MFAP1P55081 439 aaKnown RBP23.51■■□□□ 1.35
TMEM54-204ENST00000474144 SNAP25P60880 206 aa23.51■■□□□ 1.35
TMEM54-204ENST00000474144 IKQ13123 557 aaPredicted RBP23.51■■□□□ 1.35
TMEM54-204ENST00000474144 AKNAD1Q5T1N1 836 aa23.51■■□□□ 1.35
TMEM54-204ENST00000474144 IL25Q9H293 177 aa23.51■■□□□ 1.35
TMEM54-204ENST00000474144 PCDH10Q9P2E7 1040 aa23.51■■□□□ 1.35
TMEM54-204ENST00000474144 DIS3Q9Y2L1 958 aaKnown RBP23.51■■□□□ 1.35
TMEM54-204ENST00000474144 SEPT4O43236 478 aa23.5■■□□□ 1.35
TMEM54-204ENST00000474144 TAL1P17542 331 aaPredicted RBP23.5■■□□□ 1.35
TMEM54-204ENST00000474144 RCSD1Q6JBY9 416 aa23.5■■□□□ 1.35
TMEM54-204ENST00000474144 MFSD6Q6ZSS7 791 aa23.5■■□□□ 1.35
TMEM54-204ENST00000474144 FAM160B2Q86V87 743 aa23.5■■□□□ 1.35
TMEM54-204ENST00000474144 TMEM47Q9BQJ4 181 aa23.5■■□□□ 1.35
TMEM54-204ENST00000474144 TINF2Q9BSI4 451 aa23.5■■□□□ 1.35
TMEM54-204ENST00000474144 CEP290O15078 2479 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 OAZ1P54368 228 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 LRRC26Q2I0M4 334 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 GJC2Q5T442 439 aaPredicted RBP23.49■■□□□ 1.35
TMEM54-204ENST00000474144 TTC22Q5TAA0 569 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 CHURC1Q8WUH1 139 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 DDX11Q96FC9 970 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 AGBL1Q96MI9 1066 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 SENP6Q9GZR1 1112 aaPredicted RBP23.49■■□□□ 1.35
TMEM54-204ENST00000474144 PRO3102Q9H379 93 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 HOMER2Q9NSB8 354 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 TCP11L1Q9NUJ3 509 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 ZMYND8Q9ULU4 1186 aaPredicted RBP23.49■■□□□ 1.35
TMEM54-204ENST00000474144 ZNF536O15090 1300 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 NEDD4P46934 1319 aa23.49■■□□□ 1.35
TMEM54-204ENST00000474144 LAMA4Q16363 1823 aa23.48■■□□□ 1.35
TMEM54-204ENST00000474144 DNAJC25-GNG10A0A024R161 153 aa23.48■■□□□ 1.35
TMEM54-204ENST00000474144 HIP1O00291 1037 aa23.48■■□□□ 1.35
TMEM54-204ENST00000474144 ZNF213O14771 459 aa23.48■■□□□ 1.35
TMEM54-204ENST00000474144 SYN1P17600 705 aa23.48■■□□□ 1.35
TMEM54-204ENST00000474144 DNM1LO00429 736 aa23.47■■□□□ 1.35
TMEM54-204ENST00000474144 PLA2G6O60733 806 aa23.47■■□□□ 1.35
TMEM54-204ENST00000474144 FXR1P51114 621 aaKnown RBP eCLIP23.47■■□□□ 1.35
TMEM54-204ENST00000474144 CCDC96Q2M329 555 aa23.47■■□□□ 1.35
TMEM54-204ENST00000474144 TTBK2Q6IQ55 1244 aa23.47■■□□□ 1.35
TMEM54-204ENST00000474144 CCDC174Q6PII3 467 aa23.47■■□□□ 1.35
TMEM54-204ENST00000474144 PRR12Q9ULL5 1215 aa23.47■■□□□ 1.35
TMEM54-204ENST00000474144 SMCHD1A6NHR9 2005 aa23.47■■□□□ 1.35
TMEM54-204ENST00000474144 MYCNP04198 464 aaPredicted RBP23.46■■□□□ 1.35
TMEM54-204ENST00000474144 ZNF865P0CJ78 1059 aaPredicted RBP23.46■■□□□ 1.35
TMEM54-204ENST00000474144 FDX1P10109 184 aa23.46■■□□□ 1.35
TMEM54-204ENST00000474144 TOP1P11387 765 aaKnown RBP23.46■■□□□ 1.35
TMEM54-204ENST00000474144 SLC16A2P36021 539 aa23.46■■□□□ 1.35
TMEM54-204ENST00000474144 FRMPD2Q68DX3 1309 aaPredicted RBP23.46■■□□□ 1.35
TMEM54-204ENST00000474144 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.46■■□□□ 1.35
TMEM54-204ENST00000474144 ANKRD35Q8N283 1001 aa23.46■■□□□ 1.35
TMEM54-204ENST00000474144 CHST13Q8NET6 341 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms