RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ERC1Q8IUD2 1116 aa24.29■■□□□ 1.48
APP-215ENST00000474136 NUP133Q8WUM0 1156 aa24.29■■□□□ 1.48
APP-215ENST00000474136 PARP14Q460N5 1801 aa24.28■■□□□ 1.48
APP-215ENST00000474136 RAD21O60216 631 aa24.28■■□□□ 1.48
APP-215ENST00000474136 MBD4O95243 580 aa24.28■■□□□ 1.48
APP-215ENST00000474136 SNAI1O95863 264 aaPredicted RBP24.28■■□□□ 1.48
APP-215ENST00000474136 FAM83BQ5T0W9 1011 aa24.28■■□□□ 1.48
APP-215ENST00000474136 CCSAPQ6IQ19 270 aaPredicted RBP24.28■■□□□ 1.48
APP-215ENST00000474136 EXOC6Q8TAG9 804 aa24.28■■□□□ 1.48
APP-215ENST00000474136 CCDC17Q96LX7 622 aa24.28■■□□□ 1.48
APP-215ENST00000474136 PBX4Q9BYU1 374 aa24.28■■□□□ 1.48
APP-215ENST00000474136 COL11A1P12107 1806 aaPredicted RBP24.27■■□□□ 1.48
APP-215ENST00000474136 TMEM240Q5SV17 173 aa24.27■■□□□ 1.48
APP-215ENST00000474136 C12orf60Q5U649 245 aa24.27■■□□□ 1.48
APP-215ENST00000474136 MFSD5Q6N075 450 aa24.27■■□□□ 1.48
APP-215ENST00000474136 RHPN1Q8TCX5 695 aa24.27■■□□□ 1.48
APP-215ENST00000474136 PRDM12Q9H4Q4 367 aa24.27■■□□□ 1.48
APP-215ENST00000474136 ZHX1Q9UKY1 873 aaPredicted RBP24.27■■□□□ 1.48
APP-215ENST00000474136 FAM184BQ9ULE4 1060 aa24.27■■□□□ 1.48
APP-215ENST00000474136 MOXD2PA6NHM9 499 aa24.26■■□□□ 1.47
APP-215ENST00000474136 CHGBP05060 677 aa24.26■■□□□ 1.47
APP-215ENST00000474136 CCDC129Q6ZRS4 1044 aa24.26■■□□□ 1.47
APP-215ENST00000474136 GAS2L1Q99501 681 aaPredicted RBP24.26■■□□□ 1.47
APP-215ENST00000474136 BCL11AQ9H165 835 aa24.26■■□□□ 1.47
APP-215ENST00000474136 ATP8A2Q9NTI2 1148 aa24.26■■□□□ 1.47
APP-215ENST00000474136 USP17L12C9JPN9 530 aa24.25■■□□□ 1.47
APP-215ENST00000474136 USP17L21D6R901 530 aa24.25■■□□□ 1.47
APP-215ENST00000474136 APBB1O00213 710 aa24.25■■□□□ 1.47
APP-215ENST00000474136 ACRP10323 421 aa24.25■■□□□ 1.47
APP-215ENST00000474136 CSF2RAP15509 400 aa24.25■■□□□ 1.47
APP-215ENST00000474136 C16orf86Q6ZW13 317 aa24.25■■□□□ 1.47
APP-215ENST00000474136 NUP88Q99567 741 aaPredicted RBP24.25■■□□□ 1.47
APP-215ENST00000474136 KANSL2Q9H9L4 492 aa24.25■■□□□ 1.47
APP-215ENST00000474136 RIPK3Q9Y572 518 aa24.25■■□□□ 1.47
APP-215ENST00000474136 PLXNA1Q9UIW2 1896 aa24.24■■□□□ 1.47
APP-215ENST00000474136 ADCY6O43306 1168 aa24.24■■□□□ 1.47
APP-215ENST00000474136 COPB2P35606 906 aa24.24■■□□□ 1.47
APP-215ENST00000474136 CDK7P50613 346 aa24.24■■□□□ 1.47
APP-215ENST00000474136 PPIGQ13427 754 aaKnown RBP eCLIP24.24■■□□□ 1.47
APP-215ENST00000474136 RASIP1Q5U651 963 aa24.24■■□□□ 1.47
APP-215ENST00000474136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.24■■□□□ 1.47
APP-215ENST00000474136 GOPCQ9HD26 462 aa24.24■■□□□ 1.47
APP-215ENST00000474136 SYNGAP1Q96PV0 1343 aa24.23■■□□□ 1.47
APP-215ENST00000474136 ADD2P35612 726 aa24.23■■□□□ 1.47
APP-215ENST00000474136 ADGRE1Q14246 886 aa24.23■■□□□ 1.47
APP-215ENST00000474136 SNRNP48Q6IEG0 339 aaKnown RBP24.23■■□□□ 1.47
APP-215ENST00000474136 ZNF365Q70YC5 407 aa24.23■■□□□ 1.47
APP-215ENST00000474136 DDX11Q96FC9 970 aa24.23■■□□□ 1.47
APP-215ENST00000474136 GLT1D1Q96MS3 346 aa24.23■■□□□ 1.47
APP-215ENST00000474136 PPP1R12CQ9BZL4 782 aa24.23■■□□□ 1.47
APP-215ENST00000474136 DNAJC25-GNG10A0A024R161 153 aa24.22■■□□□ 1.47
APP-215ENST00000474136 DUSP11O75319 330 aaKnown RBP24.22■■□□□ 1.47
APP-215ENST00000474136 ASGR1P07306 291 aa24.22■■□□□ 1.47
APP-215ENST00000474136 C6orf222P0C671 652 aaPredicted RBP24.22■■□□□ 1.47
APP-215ENST00000474136 SLC4A3P48751 1232 aa24.22■■□□□ 1.47
APP-215ENST00000474136 CCDC85BQ15834 202 aaPredicted RBP24.22■■□□□ 1.47
APP-215ENST00000474136 MAMDC4Q6UXC1 1216 aa24.22■■□□□ 1.47
APP-215ENST00000474136 MSL3Q8N5Y2 521 aaKnown RBP24.22■■□□□ 1.47
APP-215ENST00000474136 ATXN2LQ8WWM7 1075 aaKnown RBP24.22■■□□□ 1.47
APP-215ENST00000474136 VTI1AQ96AJ9 217 aa24.22■■□□□ 1.47
APP-215ENST00000474136 ASB2Q96Q27 587 aa24.22■■□□□ 1.47
APP-215ENST00000474136 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.22■■□□□ 1.47
APP-215ENST00000474136 TEX13BQ9BXU2 312 aa24.22■■□□□ 1.47
APP-215ENST00000474136 ZBTB40Q9NUA8 1239 aa24.22■■□□□ 1.47
APP-215ENST00000474136 PPP4R2Q9NY27 417 aa24.22■■□□□ 1.47
APP-215ENST00000474136 ELP1O95163 1332 aa24.21■■□□□ 1.47
APP-215ENST00000474136 BAZ2AQ9UIF9 1905 aaKnown RBP24.21■■□□□ 1.47
APP-215ENST00000474136 MYO9BQ13459 2157 aa24.21■■□□□ 1.47
APP-215ENST00000474136 CST5P28325 142 aaPredicted RBP24.21■■□□□ 1.47
APP-215ENST00000474136 AKNAD1Q5T1N1 836 aa24.21■■□□□ 1.47
APP-215ENST00000474136 CLASRPQ8N2M8 674 aaKnown RBP24.21■■□□□ 1.47
APP-215ENST00000474136 SLF1Q9BQI6 1058 aa24.21■■□□□ 1.47
APP-215ENST00000474136 THEGQ9P2T0 379 aa24.21■■□□□ 1.47
APP-215ENST00000474136 CHD9Q3L8U1 2897 aa24.21■■□□□ 1.47
APP-215ENST00000474136 MYH8P13535 1937 aa24.21■■□□□ 1.47
APP-215ENST00000474136 MROH7Q68CQ1 1323 aa24.2■■□□□ 1.47
APP-215ENST00000474136 ACVR2BQ13705 512 aa24.2■■□□□ 1.46
APP-215ENST00000474136 CTR9Q6PD62 1173 aa24.2■■□□□ 1.46
APP-215ENST00000474136 AMOTL1Q8IY63 956 aa24.2■■□□□ 1.46
APP-215ENST00000474136 ADAMTS19Q8TE59 1207 aa24.2■■□□□ 1.46
APP-215ENST00000474136 BOLA2Q9H3K6 86 aa24.2■■□□□ 1.46
APP-215ENST00000474136 PAG1Q9NWQ8 432 aa24.2■■□□□ 1.46
APP-215ENST00000474136 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.2■■□□□ 1.46
APP-215ENST00000474136 ARVCFO00192 962 aa24.19■■□□□ 1.46
APP-215ENST00000474136 IFIT2P09913 472 aaKnown RBP24.19■■□□□ 1.46
APP-215ENST00000474136 HSP90AB4PQ58FF6 505 aa24.19■■□□□ 1.46
APP-215ENST00000474136 CCDC174Q6PII3 467 aa24.19■■□□□ 1.46
APP-215ENST00000474136 FAM126BQ8IXS8 530 aa24.19■■□□□ 1.46
APP-215ENST00000474136 CPXCR1Q8N123 301 aa24.19■■□□□ 1.46
APP-215ENST00000474136 TMEM199Q8N511 208 aa24.19■■□□□ 1.46
APP-215ENST00000474136 FGD4Q96M96 766 aa24.19■■□□□ 1.46
APP-215ENST00000474136 A0A0U1RQG5 324 aaPredicted RBP24.18■■□□□ 1.46
APP-215ENST00000474136 IGFBP4P22692 258 aa24.18■■□□□ 1.46
APP-215ENST00000474136 CYP2C18P33260 490 aa24.18■■□□□ 1.46
APP-215ENST00000474136 CCDC144BQ3MJ40 725 aa24.18■■□□□ 1.46
APP-215ENST00000474136 PCSK9Q8NBP7 692 aaKnown RBP24.18■■□□□ 1.46
APP-215ENST00000474136 UPF3AQ9H1J1 476 aaKnown RBP24.18■■□□□ 1.46
APP-215ENST00000474136 NKX2-4Q9H2Z4 354 aa24.18■■□□□ 1.46
APP-215ENST00000474136 CXXC1Q9P0U4 656 aaPredicted RBP24.18■■□□□ 1.46
APP-215ENST00000474136 SLC4A4Q9Y6R1 1079 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms