RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TMEM67Q5HYA8 995 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 GPATCH4Q5T3I0 446 aaKnown RBP16.1■□□□□ 0.17
USF1-205ENST00000473969 POTEEQ6S8J3 1075 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 STOX1Q6ZVD7 989 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 SLAIN1Q8ND83 568 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 TEX13BQ9BXU2 312 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 FRMPD2Q68DX3 1309 aaPredicted RBP16.1■□□□□ 0.17
USF1-205ENST00000473969 SLC15A5A6NIM6 579 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 STRNO43815 780 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 ADCY3O60266 1144 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 RGS2P41220 211 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 UBXN2AP68543 259 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 MB21D2Q8IYB1 491 aaPredicted RBP16.09■□□□□ 0.17
USF1-205ENST00000473969 TMTC2Q8N394 836 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 MTA3Q9BTC8 594 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 SLC38A10Q9HBR0 1119 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 SLC5A4Q9NY91 659 aa16.09■□□□□ 0.17
USF1-205ENST00000473969 EPB41L2O43491 1005 aaKnown RBP16.08■□□□□ 0.16
USF1-205ENST00000473969 PRC1O43663 620 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
USF1-205ENST00000473969 FCER1AP12319 257 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 CYP2B6P20813 491 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 PTPREP23469 700 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 OAZ1P54368 228 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 SYDE2Q5VT97 1194 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 SNRNP48Q6IEG0 339 aaKnown RBP16.08■□□□□ 0.16
USF1-205ENST00000473969 NFXL1Q6ZNB6 911 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 CATIPQ7Z7H3 387 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 DPP9Q86TI2 863 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 RIOX2Q8IUF8 465 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 TRMT44Q8IYL2 757 aaKnown RBP16.08■□□□□ 0.16
USF1-205ENST00000473969 PXYLP1Q8TE99 480 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 TMEM87BQ96K49 555 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 NEK1Q96PY6 1258 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 RAVER2Q9HCJ3 691 aaKnown RBP16.08■□□□□ 0.16
USF1-205ENST00000473969 GJD2Q9UKL4 321 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 PRR12Q9ULL5 1215 aa16.08■□□□□ 0.16
USF1-205ENST00000473969 ATP2A1O14983 1001 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 SLC34A2O95436 690 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
USF1-205ENST00000473969 SLC16A2P36021 539 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 MAP2K5Q13163 448 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 KCTD2Q14681 263 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 SEC23AQ15436 765 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 TSGA10IPQ3SY00 556 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 ASPRV1Q53RT3 343 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 TTBK2Q6IQ55 1244 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 SH3TC2Q8TF17 1288 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 TMEM106CQ9BVX2 250 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
USF1-205ENST00000473969 ZNF214Q9UL59 606 aaPredicted RBP16.07■□□□□ 0.16
USF1-205ENST00000473969 CCDC69A6NI79 296 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
USF1-205ENST00000473969 GOLGA8HP0CJ92 632 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 SNHG28P0DPA3 235 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 XRCC5P13010 732 aaKnown RBP16.06■□□□□ 0.16
USF1-205ENST00000473969 HSPA4P34932 840 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 FGD1P98174 961 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 CCDC174Q6PII3 467 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 BTNL9Q6UXG8 535 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 SYNE3Q6ZMZ3 975 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 RASGRP2Q7LDG7 609 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 REPS2Q8NFH8 660 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 ARMC5Q96C12 935 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 MMP19Q99542 508 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 FBXO40Q9UH90 709 aa16.06■□□□□ 0.16
USF1-205ENST00000473969 ELNP15502 786 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 PSMA5P28066 241 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 ANTXR2P58335 489 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 GRB14Q14449 540 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 TKFCQ3LXA3 575 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 MORN1Q5T089 497 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 DHX32Q7L7V1 743 aaKnown RBP16.05■□□□□ 0.16
USF1-205ENST00000473969 ABRAQ8N0Z2 381 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 CHST13Q8NET6 341 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 APBA2Q99767 749 aa16.05■□□□□ 0.16
USF1-205ENST00000473969 MGAMO43451 1857 aa16.04■□□□□ 0.16
USF1-205ENST00000473969 ZSWIM8A7E2V4 1837 aa16.04■□□□□ 0.16
USF1-205ENST00000473969 MYCP01106 439 aaPredicted RBP16.04■□□□□ 0.16
USF1-205ENST00000473969 ADORA2AP29274 412 aa16.04■□□□□ 0.16
USF1-205ENST00000473969 SNAP25P60880 206 aa16.04■□□□□ 0.16
USF1-205ENST00000473969 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
USF1-205ENST00000473969 CTCFLQ8NI51 663 aaPredicted RBP16.04■□□□□ 0.16
USF1-205ENST00000473969 ZNF333Q96JL9 665 aa16.04■□□□□ 0.16
USF1-205ENST00000473969 UBA5Q9GZZ9 404 aa16.04■□□□□ 0.16
USF1-205ENST00000473969 RANBP17Q9H2T7 1088 aaKnown RBP16.04■□□□□ 0.16
USF1-205ENST00000473969 CCPG1Q9ULG6 757 aa16.04■□□□□ 0.16
USF1-205ENST00000473969 SH2B2O14492 632 aaPredicted RBP16.03■□□□□ 0.16
USF1-205ENST00000473969 HMGCRP04035 888 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 ALAS1P13196 640 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 KIF5BP33176 963 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 LIFRP42702 1097 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 MFSD14CQ5VZR4 134 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms