RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CASTP20810 708 aaKnown RBP14.51□□□□□ -0.09
DDX56-209ENST00000473924 MAPK4P31152 587 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 SLC16A2P36021 539 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 COL9A3Q14050 684 aaPredicted RBP14.51□□□□□ -0.09
DDX56-209ENST00000473924 TTBK2Q6IQ55 1244 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 POTEEQ6S8J3 1075 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 OTOP1Q7RTM1 612 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 COA7Q96BR5 231 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 TRIM47Q96LD4 638 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 TCEANC2Q96MN5 208 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 SPATC1LQ9H0A9 340 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 SENP2Q9HC62 589 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 ADAMTS5Q9UNA0 930 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 CPA1P15085 419 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 CTGFP29279 349 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 SLC4A3P48751 1232 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 EXOSC10Q01780 885 aaKnown RBP14.5□□□□□ -0.09
DDX56-209ENST00000473924 TMEM132BQ14DG7 1078 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 PKN2Q16513 984 aaKnown RBP14.5□□□□□ -0.09
DDX56-209ENST00000473924 ASPRV1Q53RT3 343 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 CPXCR1Q8N123 301 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 NUP133Q8WUM0 1156 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 PORCNQ9H237 461 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 GPHNQ9NQX3 736 aaPredicted RBP14.5□□□□□ -0.09
DDX56-209ENST00000473924 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 ZSWIM8A7E2V4 1837 aa14.5□□□□□ -0.09
DDX56-209ENST00000473924 A0A0G2JMZ2 1700 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 MGAMO43451 1857 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 DHX16O60231 1041 aaKnown RBP14.49□□□□□ -0.09
DDX56-209ENST00000473924 STAT3P40763 770 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 LIFRP42702 1097 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 CAP1Q01518 475 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 SYDE2Q5VT97 1194 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 BTNL9Q6UXG8 535 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 SYNE3Q6ZMZ3 975 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 NCAPG2Q86XI2 1143 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 ZNF654Q8IZM8 581 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 MOV10L1Q9BXT6 1211 aaKnown RBP14.49□□□□□ -0.09
DDX56-209ENST00000473924 TEX13BQ9BXU2 312 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 SLC38A10Q9HBR0 1119 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 RAVER2Q9HCJ3 691 aaKnown RBP14.49□□□□□ -0.09
DDX56-209ENST00000473924 SLC12A7Q9Y666 1083 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 IVNS1ABPQ9Y6Y0 642 aa14.49□□□□□ -0.09
DDX56-209ENST00000473924 COL11A1P12107 1806 aaPredicted RBP14.48□□□□□ -0.09
DDX56-209ENST00000473924 DDAH1O94760 285 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 SLC25A27O95847 323 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 ERCC3P19447 782 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 RPS6KB1P23443 525 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 PRMT2P55345 433 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 ANAPC15P60006 121 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 SNAP25P60880 206 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 SNRNP48Q6IEG0 339 aaKnown RBP14.48□□□□□ -0.09
DDX56-209ENST00000473924 CCDC174Q6PII3 467 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 Q6ZUG5 572 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 RUFY3Q7L099 469 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 GPR142Q7Z601 462 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 PLEKHH3Q7Z736 793 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 REPS2Q8NFH8 660 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 CTCFLQ8NI51 663 aaPredicted RBP14.48□□□□□ -0.09
DDX56-209ENST00000473924 MCOLN1Q9GZU1 580 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 MROH8Q9H579 483 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 SRRDQ9UH36 339 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 ZNF214Q9UL59 606 aaPredicted RBP14.48□□□□□ -0.09
DDX56-209ENST00000473924 PTPN22Q9Y2R2 807 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 CYP46A1Q9Y6A2 500 aa14.48□□□□□ -0.09
DDX56-209ENST00000473924 KLRF2D3W0D1 207 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 CALM1P0DP23 149 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 CALM2P0DP24 149 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 CALM3P0DP25 149 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 KIF5BP33176 963 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 COPB2P35606 906 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 OAZ1P54368 228 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 PRKCZQ05513 592 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 TROAPQ12815 778 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 GRM4Q14833 912 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 FBXO46Q6PJ61 603 aaPredicted RBP14.47□□□□□ -0.09
DDX56-209ENST00000473924 RIOX2Q8IUF8 465 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 TNS4Q8IZW8 715 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 SHCBP1Q8NEM2 672 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 RAET1EQ8TD07 263 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 MYL10Q9BUA6 226 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 TM6SF1Q9BZW5 370 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 CPVLQ9H3G5 476 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 UPF2Q9HAU5 1272 aaKnown RBP14.47□□□□□ -0.09
DDX56-209ENST00000473924 ZSWIM6Q9HCJ5 1215 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 MAD2L2Q9UI95 211 aa14.47□□□□□ -0.09
DDX56-209ENST00000473924 NAP1L2Q9ULW6 460 aaPredicted RBP14.47□□□□□ -0.09
DDX56-209ENST00000473924 ATP2A1O14983 1001 aa14.46□□□□□ -0.09
DDX56-209ENST00000473924 SGMS1Q86VZ5 419 aa14.46□□□□□ -0.09
DDX56-209ENST00000473924 RAB11FIP4Q86YS3 637 aa14.46□□□□□ -0.09
DDX56-209ENST00000473924 ADGRF4Q8IZF3 695 aa14.46□□□□□ -0.09
DDX56-209ENST00000473924 STAG2Q8N3U4 1231 aa14.46□□□□□ -0.09
DDX56-209ENST00000473924 BRF1Q92994 677 aa14.46□□□□□ -0.09
DDX56-209ENST00000473924 MAP3K14Q99558 947 aa14.46□□□□□ -0.09
DDX56-209ENST00000473924 NUDT12Q9BQG2 462 aa14.46□□□□□ -0.09
DDX56-209ENST00000473924 UPF3BQ9BZI7 483 aaKnown RBP14.46□□□□□ -0.09
DDX56-209ENST00000473924 RANBP17Q9H2T7 1088 aaKnown RBP14.46□□□□□ -0.09
DDX56-209ENST00000473924 VAT1LQ9HCJ6 419 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms