RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SMCHD1A6NHR9 2005 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 HAND2P61296 217 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 RIOX2Q8IUF8 465 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 TRPV1Q8NER1 839 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 MKL1Q969V6 931 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 DSCC1Q9BVC3 393 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 MTMR4Q9NYA4 1195 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 CLIP2Q9UDT6 1046 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 DDX20Q9UHI6 824 aaKnown RBP21.36■■□□□ 1.01
SNX4-204ENST00000473417 ANAPC4Q9UJX5 808 aa21.36■■□□□ 1.01
SNX4-204ENST00000473417 SZT2Q5T011 3432 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 ZMYM6O95789 1325 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 SGSM2O43147 1006 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 MSCO60682 206 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 FCER1AP12319 257 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 NEDD1Q8NHV4 660 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 SLF1Q9BQI6 1058 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 SLC5A4Q9NY91 659 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 TACC3Q9Y6A5 838 aa21.35■■□□□ 1.01
SNX4-204ENST00000473417 TTLL1O95922 423 aa21.34■■□□□ 1.01
SNX4-204ENST00000473417 STAT3P40763 770 aa21.34■■□□□ 1.01
SNX4-204ENST00000473417 FAM47AQ5JRC9 791 aa21.34■■□□□ 1.01
SNX4-204ENST00000473417 C7orf61Q8IZ16 206 aa21.34■■□□□ 1.01
SNX4-204ENST00000473417 GMCL1P1Q8NEA9 526 aa21.34■■□□□ 1.01
SNX4-204ENST00000473417 MAML3Q96JK9 1138 aa21.34■■□□□ 1.01
SNX4-204ENST00000473417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.34■■□□□ 1.01
SNX4-204ENST00000473417 MCM3APO60318 1980 aa21.34■■□□□ 1.01
SNX4-204ENST00000473417 ZNF213O14771 459 aa21.33■■□□□ 1.01
SNX4-204ENST00000473417 TSPY3P0CV98 308 aa21.33■■□□□ 1.01
SNX4-204ENST00000473417 TSPY8P0CW00 308 aa21.33■■□□□ 1.01
SNX4-204ENST00000473417 CNGA1P29973 690 aa21.33■■□□□ 1.01
SNX4-204ENST00000473417 COPB2P35606 906 aa21.33■■□□□ 1.01
SNX4-204ENST00000473417 LRRC47Q8N1G4 583 aaKnown RBP21.33■■□□□ 1.01
SNX4-204ENST00000473417 MMP19Q99542 508 aa21.33■■□□□ 1.01
SNX4-204ENST00000473417 TOMM22Q9NS69 142 aa21.33■■□□□ 1.01
SNX4-204ENST00000473417 TFAP4Q01664 338 aa21.32■■□□□ 1
SNX4-204ENST00000473417 PTH1RQ03431 593 aa21.32■■□□□ 1
SNX4-204ENST00000473417 PRPF38AQ8NAV1 312 aaKnown RBP21.32■■□□□ 1
SNX4-204ENST00000473417 TEX13BQ9BXU2 312 aa21.32■■□□□ 1
SNX4-204ENST00000473417 CTNNA3Q9UI47 895 aa21.32■■□□□ 1
SNX4-204ENST00000473417 A0A1W2PPC1 479 aa21.31■■□□□ 1
SNX4-204ENST00000473417 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
SNX4-204ENST00000473417 TBC1D10CQ8IV04 446 aa21.31■■□□□ 1
SNX4-204ENST00000473417 ESYT1Q9BSJ8 1104 aa21.31■■□□□ 1
SNX4-204ENST00000473417 LTBP2Q14767 1821 aa21.31■■□□□ 1
SNX4-204ENST00000473417 TSPY2A6NKD2 308 aa21.3■■□□□ 1
SNX4-204ENST00000473417 ATP2A1O14983 1001 aa21.3■■□□□ 1
SNX4-204ENST00000473417 SEPT4O43236 478 aa21.3■■□□□ 1
SNX4-204ENST00000473417 RANBP6O60518 1105 aaKnown RBP21.3■■□□□ 1
SNX4-204ENST00000473417 CDC45O75419 566 aa21.3■■□□□ 1
SNX4-204ENST00000473417 FGRP09769 529 aa21.3■■□□□ 1
SNX4-204ENST00000473417 KCTD2Q14681 263 aa21.3■■□□□ 1
SNX4-204ENST00000473417 IMMTQ16891 758 aaKnown RBP21.3■■□□□ 1
SNX4-204ENST00000473417 AKNAD1Q5T1N1 836 aa21.3■■□□□ 1
SNX4-204ENST00000473417 SNRNP48Q6IEG0 339 aaKnown RBP21.3■■□□□ 1
SNX4-204ENST00000473417 MFSD6Q6ZSS7 791 aa21.3■■□□□ 1
SNX4-204ENST00000473417 DIS3Q9Y2L1 958 aaKnown RBP21.3■■□□□ 1
SNX4-204ENST00000473417 LAMA3Q16787 3333 aa21.3■■□□□ 1
SNX4-204ENST00000473417 DNM1LO00429 736 aa21.29■■□□□ 1
SNX4-204ENST00000473417 ORC4O43929 436 aa21.29■■□□□ 1
SNX4-204ENST00000473417 PGK2P07205 417 aa21.29■■□□□ 1
SNX4-204ENST00000473417 LRRC26Q2I0M4 334 aa21.29■■□□□ 1
SNX4-204ENST00000473417 ZNF792Q3KQV3 632 aa21.29■■□□□ 1
SNX4-204ENST00000473417 KIAA1211Q6ZU35 1233 aa21.29■■□□□ 1
SNX4-204ENST00000473417 STAG1Q8WVM7 1258 aa21.29■■□□□ 1
SNX4-204ENST00000473417 SLC38A10Q9HBR0 1119 aa21.29■■□□□ 1
SNX4-204ENST00000473417 FEM1BQ9UK73 627 aa21.29■■□□□ 1
SNX4-204ENST00000473417 ZMYND8Q9ULU4 1186 aaPredicted RBP21.29■■□□□ 1
SNX4-204ENST00000473417 SLFN13Q68D06 897 aa21.28■■□□□ 1
SNX4-204ENST00000473417 CASC1Q6TDU7 716 aa21.28■■□□□ 1
SNX4-204ENST00000473417 KIFC2Q96AC6 838 aa21.28■■□□□ 1
SNX4-204ENST00000473417 GDF15Q99988 308 aa21.28■■□□□ 1
SNX4-204ENST00000473417 RNF41Q9H4P4 317 aaPredicted RBP21.28■■□□□ 1
SNX4-204ENST00000473417 RIPK3Q9Y572 518 aa21.28■■□□□ 1
SNX4-204ENST00000473417 LRRC37A2A6NM11 1700 aa21.28■■□□□ 1
SNX4-204ENST00000473417 LCTP09848 1927 aa21.27■■□□□ 1
SNX4-204ENST00000473417 BMP3P12645 472 aa21.27■■□□□ 1
SNX4-204ENST00000473417 PPP4R3BQ5MIZ7 849 aa21.27■■□□□ 1
SNX4-204ENST00000473417 PRAMEF19Q5SWL8 479 aa21.27■■□□□ 1
SNX4-204ENST00000473417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.27■■□□□ 1
SNX4-204ENST00000473417 GMCL1Q96IK5 515 aa21.27■■□□□ 1
SNX4-204ENST00000473417 TINF2Q9BSI4 451 aa21.27■■□□□ 1
SNX4-204ENST00000473417 IL17RBQ9NRM6 502 aa21.27■■□□□ 1
SNX4-204ENST00000473417 NRBP1Q9UHY1 535 aa21.27■■□□□ 1
SNX4-204ENST00000473417 U3KPZ7 1027 aaPredicted RBP21.27■■□□□ 1
SNX4-204ENST00000473417 NMT2O60551 498 aa21.26■□□□□ 0.99
SNX4-204ENST00000473417 ZBED4O75132 1171 aa21.26■□□□□ 0.99
SNX4-204ENST00000473417 OAZ1P54368 228 aa21.26■□□□□ 0.99
SNX4-204ENST00000473417 CPXCR1Q8N123 301 aa21.26■□□□□ 0.99
SNX4-204ENST00000473417 MAP4K1Q92918 833 aa21.26■□□□□ 0.99
SNX4-204ENST00000473417 ANO2Q9NQ90 1003 aa21.26■□□□□ 0.99
SNX4-204ENST00000473417 NEDD4P46934 1319 aa21.26■□□□□ 0.99
SNX4-204ENST00000473417 DNAJC25-GNG10A0A024R161 153 aa21.25■□□□□ 0.99
SNX4-204ENST00000473417 PCP11498 1178 aaKnown RBP21.25■□□□□ 0.99
SNX4-204ENST00000473417 SYN1P17600 705 aa21.25■□□□□ 0.99
SNX4-204ENST00000473417 BMP8BP34820 402 aa21.25■□□□□ 0.99
SNX4-204ENST00000473417 NOVP48745 357 aa21.25■□□□□ 0.99
SNX4-204ENST00000473417 STAT2P52630 851 aa21.25■□□□□ 0.99
SNX4-204ENST00000473417 ANO1Q5XXA6 986 aa21.25■□□□□ 0.99
SNX4-204ENST00000473417 ARRDC4Q8NCT1 418 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms