RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 MMEP08473 750 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 MSL3P1P0C860 447 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 TUBA1BP68363 451 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 FSCBQ5H9T9 825 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 TUBA1AQ71U36 451 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 BHMTQ93088 406 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 SPG7Q9UQ90 795 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 SEC24BO95487 1268 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 STAT6P42226 847 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 ESCO1Q5FWF5 840 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 DESI2Q9BSY9 194 aa9.84□□□□□ -0.83
COL6A3-210ENST00000473258 KRT38O76015 456 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 MAP4P27816 1152 aaKnown RBP9.83□□□□□ -0.84
COL6A3-210ENST00000473258 NAP1L4Q99733 375 aaKnown RBP9.83□□□□□ -0.84
COL6A3-210ENST00000473258 VPS16Q9H269 839 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 HAUS2Q9NVX0 235 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 R3HDM2Q9Y2K5 976 aaKnown RBP9.83□□□□□ -0.84
COL6A3-210ENST00000473258 POLA1P09884 1462 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-210ENST00000473258 TBKBP1A7MCY6 615 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 SKAP2O75563 359 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-210ENST00000473258 CAPN12Q6ZSI9 719 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 SYCE1Q8N0S2 351 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 BTBD7Q9P203 1132 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 MYO1AQ9UBC5 1043 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 SLC12A7Q9Y666 1083 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 PLEKHH2Q8IVE3 1493 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 A0A087WZG4 1122 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 TBC1D8O95759 1140 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 AKR1D1P51857 326 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 NLRP6P59044 892 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 GUCY1A3Q02108 690 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 NLRP9Q7RTR0 991 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 NLRP14Q86W24 1093 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 WDR60Q8WVS4 1066 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 RPS6KA2Q15349 733 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 CEP78Q5JTW2 689 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 ANKRD35Q8N283 1001 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 DHX58Q96C10 678 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 BRD8Q9H0E9 1235 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 ETNK1Q9HBU6 452 aa9.83□□□□□ -0.84
COL6A3-210ENST00000473258 WDR91A4D1P6 747 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 STX10O60499 249 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 GUCY1B2O75343 617 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 ZNF76P36508 570 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 MTHFSP49914 203 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 STRN3Q13033 797 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 MLKLQ8NB16 471 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 CUL5Q93034 780 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 THUMPD2Q9BTF0 503 aaKnown RBP9.82□□□□□ -0.84
COL6A3-210ENST00000473258 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 NOVA2Q9UNW9 492 aaKnown RBP9.82□□□□□ -0.84
COL6A3-210ENST00000473258 HMOX1P09601 288 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 MMEL1Q495T6 779 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 NUGGCQ68CJ6 796 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 NKTRP30414 1462 aaKnown RBP9.82□□□□□ -0.84
COL6A3-210ENST00000473258 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 NVLO15381 856 aaKnown RBP9.82□□□□□ -0.84
COL6A3-210ENST00000473258 ALDH1L1O75891 902 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 NLRP12P59046 1061 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 MYBPC2Q14324 1141 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 DAB2IPQ5VWQ8 1189 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 EMBQ6PCB8 327 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 SGSM3Q96HU1 749 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 DACH2Q96NX9 599 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 GINS4Q9BRT9 223 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 IFIH1Q9BYX4 1025 aaKnown RBP9.82□□□□□ -0.84
COL6A3-210ENST00000473258 ANKFY1Q9P2R3 1169 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 DCDC2Q9UHG0 476 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 FBXL5Q9UKA1 691 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 GADD45BO75293 160 aaPredicted RBP9.82□□□□□ -0.84
COL6A3-210ENST00000473258 CDC25BP30305 580 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 PEX26Q7Z412 305 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 RASSF3Q86WH2 238 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 STX12Q86Y82 276 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 CCDC82Q8N4S0 544 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 SYT2Q8N9I0 419 aaPredicted RBP9.82□□□□□ -0.84
COL6A3-210ENST00000473258 RABL2BQ9UNT1 228 aa9.82□□□□□ -0.84
COL6A3-210ENST00000473258 PYGBP11216 843 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 FOSL2P15408 326 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 ADKP55263 362 aaKnown RBP9.81□□□□□ -0.84
COL6A3-210ENST00000473258 IGBP1P78318 339 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 TRMT10CQ7L0Y3 403 aaKnown RBP9.81□□□□□ -0.84
COL6A3-210ENST00000473258 GATAD2AQ86YP4 633 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 MOV10L1Q9BXT6 1211 aaKnown RBP9.81□□□□□ -0.84
COL6A3-210ENST00000473258 TMOD4Q9NZQ9 345 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 NFE2L3Q9Y4A8 694 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 A0A1B0GVL5 298 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 GOLGA8CPA6NN73 597 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 WTAPQ15007 396 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 JADE1Q6IE81 842 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 TUBA3EQ6PEY2 450 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 TTC16Q8NEE8 873 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 KDM4CQ9H3R0 1056 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 ATP6V0A4Q9HBG4 840 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 TRPC6Q9Y210 931 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 MAGEA13PA6NCF6 341 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 H0Y626 953 aa9.81□□□□□ -0.84
COL6A3-210ENST00000473258 KRIT1O00522 736 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms