RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 NASPP49321 788 aaPredicted RBP14.73□□□□□ -0.05
VPS13D-205ENST00000473099 NAPAP54920 295 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 SLC35G1Q2M3R5 365 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 NOL9Q5SY16 702 aaKnown RBP14.73□□□□□ -0.05
VPS13D-205ENST00000473099 WWC2Q6AWC2 1192 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 KCTD1Q719H9 257 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 HEATR3Q7Z4Q2 680 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 PNMA8AQ86V59 439 aaPredicted RBP14.73□□□□□ -0.05
VPS13D-205ENST00000473099 TEX2Q8IWB9 1127 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 SCYL3Q8IZE3 742 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 ADGRF4Q8IZF3 695 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 BLIDQ8IZY5 108 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 JMYQ8N9B5 988 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 CHURC1Q8WUH1 139 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 LPAR1Q92633 364 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 CHAMP1Q96JM3 812 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 USP28Q96RU2 1077 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 PIGSQ96S52 555 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 UBA5Q9GZZ9 404 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 ZMYND12Q9H0C1 365 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 GLT8D2Q9H1C3 349 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 C6orf50Q9HD87 102 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 PICK1Q9NRD5 415 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 ISY1Q9ULR0 285 aaKnown RBP14.73□□□□□ -0.05
VPS13D-205ENST00000473099 PCDHA4Q9UN74 947 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 CEP131Q9UPN4 1083 aa14.73□□□□□ -0.05
VPS13D-205ENST00000473099 SMCHD1A6NHR9 2005 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 A0A1W2PRG0 241 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 ZBTB5O15062 677 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 RAD21O60216 631 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 NF2P35240 595 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 STAT2P52630 851 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 USP14P54578 494 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 STK38Q15208 465 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 ANO1Q5XXA6 986 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 RASGRP2Q7LDG7 609 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 FAM160B2Q86V87 743 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 HOMER1Q86YM7 354 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 PIBF1Q8WXW3 757 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 WRNIP1Q96S55 665 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 FEZ1Q99689 392 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 WDR18Q9BV38 432 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 KIAA1683Q9H0B3 1180 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 JMJD4Q9H9V9 463 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 VAT1LQ9HCJ6 419 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 MORC2Q9Y6X9 1032 aaPredicted RBP14.72□□□□□ -0.05
VPS13D-205ENST00000473099 SSC5DA1L4H1 1573 aa14.72□□□□□ -0.05
VPS13D-205ENST00000473099 COL11A1P12107 1806 aaPredicted RBP14.71□□□□□ -0.05
VPS13D-205ENST00000473099 PPP1R12BO60237 982 aaPredicted RBP14.71□□□□□ -0.05
VPS13D-205ENST00000473099 IKQ13123 557 aaPredicted RBP14.71□□□□□ -0.05
VPS13D-205ENST00000473099 SF3A1Q15459 793 aaKnown RBP14.71□□□□□ -0.05
VPS13D-205ENST00000473099 NPY5RQ15761 445 aa14.71□□□□□ -0.05
VPS13D-205ENST00000473099 SYDE2Q5VT97 1194 aa14.71□□□□□ -0.05
VPS13D-205ENST00000473099 LINC00301Q8NCQ3 95 aa14.71□□□□□ -0.05
VPS13D-205ENST00000473099 ACER1Q8TDN7 264 aa14.71□□□□□ -0.05
VPS13D-205ENST00000473099 GPKOWQ92917 476 aaPredicted RBP eCLIP14.71□□□□□ -0.05
VPS13D-205ENST00000473099 KLRG1Q96E93 195 aa14.71□□□□□ -0.05
VPS13D-205ENST00000473099 FEM1BQ9UK73 627 aa14.71□□□□□ -0.05
VPS13D-205ENST00000473099 SCAF8Q9UPN6 1271 aaKnown RBP14.71□□□□□ -0.05
VPS13D-205ENST00000473099 TRPM7Q96QT4 1865 aa14.71□□□□□ -0.05
VPS13D-205ENST00000473099 TMEM232C9JQI7 657 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 KIF3CO14782 793 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 WDR46O15213 610 aaKnown RBP14.7□□□□□ -0.06
VPS13D-205ENST00000473099 PPP6R2O75170 966 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 HSPA6P17066 643 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 ECE1P42892 770 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 NR5A1Q13285 461 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 SLC39A14Q15043 492 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 MCTP2Q6DN12 878 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 TTBK2Q6IQ55 1244 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 KRT26Q7Z3Y9 468 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 GPT2Q8TD30 523 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 TNFRSF25Q93038 417 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 SHISA4Q96DD7 197 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 CPVLQ9H3G5 476 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 TAF1DQ9H5J8 278 aaPredicted RBP14.7□□□□□ -0.06
VPS13D-205ENST00000473099 RLFQ13129 1914 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 LOC285556D6RIA3 1793 aa14.7□□□□□ -0.06
VPS13D-205ENST00000473099 CCDC194A0A1B0GVG4 234 aa14.69□□□□□ -0.06
VPS13D-205ENST00000473099 SMCO2A6NFE2 343 aa14.69□□□□□ -0.06
VPS13D-205ENST00000473099 USP17L10C9JJH3 530 aa14.69□□□□□ -0.06
VPS13D-205ENST00000473099 SPTLC2O15270 562 aa14.69□□□□□ -0.06
VPS13D-205ENST00000473099 GADD45BO75293 160 aaPredicted RBP14.69□□□□□ -0.06
VPS13D-205ENST00000473099 INPP5BP32019 993 aa14.69□□□□□ -0.06
VPS13D-205ENST00000473099 KRT25Q7Z3Z0 450 aa14.69□□□□□ -0.06
VPS13D-205ENST00000473099 OXER1Q8TDS5 423 aa14.69□□□□□ -0.06
VPS13D-205ENST00000473099 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.69□□□□□ -0.06
VPS13D-205ENST00000473099 TRIM75PA6NK02 468 aa14.68□□□□□ -0.06
VPS13D-205ENST00000473099 C19orf81C9J6K1 198 aa14.68□□□□□ -0.06
VPS13D-205ENST00000473099 FDX1P10109 184 aa14.68□□□□□ -0.06
VPS13D-205ENST00000473099 VEGFAP15692 232 aaPredicted RBP14.68□□□□□ -0.06
VPS13D-205ENST00000473099 SLC16A2P36021 539 aa14.68□□□□□ -0.06
VPS13D-205ENST00000473099 ME1P48163 572 aa14.68□□□□□ -0.06
VPS13D-205ENST00000473099 IREB2P48200 963 aaKnown RBP14.68□□□□□ -0.06
VPS13D-205ENST00000473099 ADCY7P51828 1080 aa14.68□□□□□ -0.06
VPS13D-205ENST00000473099 MRPL12P52815 198 aaKnown RBP14.68□□□□□ -0.06
VPS13D-205ENST00000473099 CEBPZQ03701 1054 aaKnown RBP14.68□□□□□ -0.06
VPS13D-205ENST00000473099 CDC37Q16543 378 aaPredicted RBP14.68□□□□□ -0.06
VPS13D-205ENST00000473099 QRICH1Q2TAL8 776 aa14.68□□□□□ -0.06
VPS13D-205ENST00000473099 ADALQ6DHV7 355 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms