RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.44
SMARCD3-208ENST00000472789 ARHGAP39Q9C0H5 1083 aa12.33□□□□□ -0.44
SMARCD3-208ENST00000472789 GPCPD1Q9NPB8 672 aa12.33□□□□□ -0.44
SMARCD3-208ENST00000472789 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
SMARCD3-208ENST00000472789 FRMPD2Q68DX3 1309 aaPredicted RBP12.33□□□□□ -0.44
SMARCD3-208ENST00000472789 PSMC4P43686 418 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 FCGRTP55899 365 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 ANTXR2P58335 489 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 TMTC2Q8N394 836 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 TMEM87BQ96K49 555 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 TCEANC2Q96MN5 208 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 LRRC2Q9BYS8 371 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 EFCC1Q9HA90 598 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 TXNRD2Q9NNW7 524 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 SH2B1Q9NRF2 756 aaPredicted RBP12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 FEM1BQ9UK73 627 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 PPP1R9AQ9ULJ8 1098 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 RABGAP1Q9Y3P9 1069 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 TRIM17Q9Y577 477 aa12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 RANBP2P49792 3224 aaKnown RBP12.32□□□□□ -0.44
SMARCD3-208ENST00000472789 A0A0C4DFX4 3053 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 TNPO2O14787 897 aaKnown RBP12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 GOLGA8HP0CJ92 632 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 NOVP48745 357 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 STAT2P52630 851 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 AK2P54819 239 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 ERVK-9P63128 1117 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 ERVK-24P63145 666 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 CCNA1P78396 465 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 FBXL16Q8N461 479 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 CHURC1Q8WUH1 139 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 ANKS1AQ92625 1134 aa12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
SMARCD3-208ENST00000472789 CCDC69A6NI79 296 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 DHX16O60231 1041 aaKnown RBP12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 ZBED4O75132 1171 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 PDHBP11177 359 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 SLC16A2P36021 539 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 EXOSC10Q01780 885 aaKnown RBP12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 SEC23AQ15436 765 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 Q3C1V9 767 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 FBXO46Q6PJ61 603 aaPredicted RBP12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 LBX2Q6XYB7 198 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 SYNE3Q6ZMZ3 975 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 CATIPQ7Z7H3 387 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 FAM160B2Q86V87 743 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 CPXCR1Q8N123 301 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 MB21D1Q8N884 522 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 PRPF38AQ8NAV1 312 aaKnown RBP12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 NUP133Q8WUM0 1156 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 SENP2Q9HC62 589 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 BTBD7Q9P203 1132 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 MYPNQ86TC9 1320 aa12.3□□□□□ -0.44
SMARCD3-208ENST00000472789 VWA5AO00534 786 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 SH2B2O14492 632 aaPredicted RBP12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 CNMDO75829 334 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 PARP1P09874 1014 aaKnown RBP12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 CPA1P15085 419 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 HOXD10P28358 340 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 SNAP25P60880 206 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 ZNF543Q08ER8 600 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 COL9A3Q14050 684 aaPredicted RBP12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 POTEEQ6S8J3 1075 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 Q6ZUG5 572 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 OTOP1Q7RTM1 612 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 IGDCC4Q8TDY8 1250 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 COA7Q96BR5 231 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
SMARCD3-208ENST00000472789 CTGFP29279 349 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 MAPK4P31152 587 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 STAT3P40763 770 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 CAP1Q01518 475 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 TMEM132BQ14DG7 1078 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 GPATCH4Q5T3I0 446 aaKnown RBP12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 SYDE2Q5VT97 1194 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 CCDC174Q6PII3 467 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 NCAPG2Q86XI2 1143 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 RAB11FIP4Q86YS3 637 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 INTS4Q96HW7 963 aaKnown RBP12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 TMX3Q96JJ7 454 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 MYL10Q9BUA6 226 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 MOV10L1Q9BXT6 1211 aaKnown RBP12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 UBA5Q9GZZ9 404 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 SPATC1LQ9H0A9 340 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 PORCNQ9H237 461 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 RAVER2Q9HCJ3 691 aaKnown RBP12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 IVNS1ABPQ9Y6Y0 642 aa12.28□□□□□ -0.44
SMARCD3-208ENST00000472789 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 LIFRP42702 1097 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 ASPRV1Q53RT3 343 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms