RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NEUROD6Q96NK8 337 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 MCMBPQ9BTE3 642 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 KLHL25Q9H0H3 589 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 CACNA2D2Q9NY47 1150 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 WDR64B1ANS9 1081 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 KCNH1O95259 989 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 PYGMP11217 842 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 LCP1P13796 627 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 NRLP54845 237 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 SOS2Q07890 1332 aaPredicted RBP3.4□□□□□ -1.86
XRN1-210ENST00000472697 ABCC8Q09428 1581 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 HIF1AQ16665 826 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 INAVAQ3KP66 663 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 ATP13A4Q4VNC1 1196 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 ACBD5Q5T8D3 534 aaPredicted RBP3.4□□□□□ -1.86
XRN1-210ENST00000472697 HEATR6Q6AI08 1181 aaKnown RBP3.4□□□□□ -1.86
XRN1-210ENST00000472697 WWC2Q6AWC2 1192 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 SYT9Q86SS6 491 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 SAMD3Q8N6K7 520 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 PJA1Q8NG27 643 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 LPIN3Q9BQK8 851 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 AARSD1Q9BTE6 412 aaKnown RBP3.4□□□□□ -1.86
XRN1-210ENST00000472697 CNTNAP4Q9C0A0 1308 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 EMC7Q9NPA0 242 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 NDFIP2Q9NV92 336 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 THG1LQ9NWX6 298 aaKnown RBP3.4□□□□□ -1.86
XRN1-210ENST00000472697 HIF3AQ9Y2N7 669 aa3.4□□□□□ -1.86
XRN1-210ENST00000472697 GPR55Q9Y2T6 319 aaPredicted RBP3.4□□□□□ -1.86
XRN1-210ENST00000472697 SYNJ1O43426 1573 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 hCG_1984214I3L0E3 225 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 MEIS1O00470 390 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 TNFRSF10CO14798 259 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 TM4SF5O14894 197 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 ADAM11O75078 769 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 AVPP01185 164 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 SRGAP2CP0DJJ0 459 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 CDCP2Q5VXM1 449 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 CCDC84Q86UT8 332 aaPredicted RBP3.4□□□□□ -1.87
XRN1-210ENST00000472697 CCDC103Q8IW40 242 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 PHACTR4Q8IZ21 702 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 GSTCDQ8NEC7 633 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 RIN2Q8WYP3 895 aaPredicted RBP3.4□□□□□ -1.87
XRN1-210ENST00000472697 FUBP3Q96I24 572 aaKnown RBP eCLIP3.4□□□□□ -1.87
XRN1-210ENST00000472697 TTC1Q99614 292 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 SARGQ9BW04 601 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 UBA5Q9GZZ9 404 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 PHAXQ9H814 394 aaKnown RBP3.4□□□□□ -1.87
XRN1-210ENST00000472697 RSAD1Q9HA92 442 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 VPS45Q9NRW7 570 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 DNM3Q9UQ16 869 aa3.4□□□□□ -1.87
XRN1-210ENST00000472697 TRAV20A0A0B4J274 112 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 LINC01387J3KSC0 135 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 PLIN1O60240 522 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 RFPL3O75679 317 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 ETF1P62495 437 aaKnown RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 DSG1Q02413 1049 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 IKBKEQ14164 716 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 PDCD1Q15116 288 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 DPY19L1Q2PZI1 675 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 FNDC3BQ53EP0 1204 aaKnown RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 CDCA2Q69YH5 1023 aaPredicted RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 NXNQ6DKJ4 435 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 LMBR1LQ6UX01 489 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 SUGP1Q8IWZ8 645 aaKnown RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 IGSF22Q8N9C0 903 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 PPP1R35Q8TAP8 253 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 CHTF18Q8WVB6 975 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 KLHDC7BQ96G42 594 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 ACO2Q99798 780 aaKnown RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 KCNK4Q9NYG8 393 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 MARK1Q9P0L2 795 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 PPARGC1AQ9UBK2 798 aaKnown RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 PUF60Q9UHX1 559 aaKnown RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 FBXL7Q9UJT9 491 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 CDC23Q9UJX2 597 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 DMTF1Q9Y222 760 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 PCDHGC5Q9Y5F6 944 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 FAM187AA6NFU0 413 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 RASSF10A6NK89 507 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 TRAF5O00463 557 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 TBX3O15119 743 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 SLC26A4O43511 780 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 LRRN2O75325 713 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 CT47B1P0C2W7 299 aaPredicted RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 FAM157BP0CG42 384 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 TRIM27P14373 513 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 DRD2P14416 443 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 SMCPP49901 116 aaPredicted RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 GPLD1P80108 840 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 PPP2R3AQ06190 1150 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 TOMM20Q15388 145 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 ARHGAP29Q52LW3 1261 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 WDR78Q5VTH9 848 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 IQSEC1Q6DN90 963 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 SRLQ86TD4 932 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 SPATS2Q86XZ4 545 aaKnown RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 PASD1Q8IV76 773 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 CPA6Q8N4T0 437 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 ANKRD42Q8N9B4 389 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 GALNT11Q8NCW6 608 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms