RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 HOXC10Q9NYD6 342 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
UBE2F-220ENST00000472479 MAD2L2Q9UI95 211 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 PNMA3Q9UL41 463 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 TRPM7Q96QT4 1865 aa12.22□□□□□ -0.45
UBE2F-220ENST00000472479 PALM3A6NDB9 673 aaPredicted RBP12.21□□□□□ -0.45
UBE2F-220ENST00000472479 ZBED4O75132 1171 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 PPFIA3O75145 1194 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 LARGE1O95461 756 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 CDC27P30260 824 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 HTRA3P83110 453 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 KIF23Q02241 960 aaPredicted RBP12.21□□□□□ -0.45
UBE2F-220ENST00000472479 NOGQ13253 232 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 COG2Q14746 738 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 KIAA1755Q5JYT7 1200 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 SYDE2Q5VT97 1194 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 RASGRP2Q7LDG7 609 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 PRPF38AQ8NAV1 312 aaKnown RBP12.21□□□□□ -0.45
UBE2F-220ENST00000472479 GTF3C6Q969F1 213 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 RRP36Q96EU6 259 aaKnown RBP12.21□□□□□ -0.45
UBE2F-220ENST00000472479 C12orf42Q96LP6 360 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 SLF1Q9BQI6 1058 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 HPS5Q9UPZ3 1129 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 SMC3Q9UQE7 1217 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 KIF3AQ9Y496 699 aa12.21□□□□□ -0.45
UBE2F-220ENST00000472479 RASSF10A6NK89 507 aa12.21□□□□□ -0.46
UBE2F-220ENST00000472479 PLEKHA8P1O95397 391 aa12.21□□□□□ -0.46
UBE2F-220ENST00000472479 TREML2Q5T2D2 321 aa12.21□□□□□ -0.46
UBE2F-220ENST00000472479 CATSPERGQ6ZRH7 1159 aa12.21□□□□□ -0.46
UBE2F-220ENST00000472479 TMTC3Q6ZXV5 915 aa12.21□□□□□ -0.46
UBE2F-220ENST00000472479 SMCR8Q8TEV9 937 aaPredicted RBP12.21□□□□□ -0.46
UBE2F-220ENST00000472479 PHKBQ93100 1093 aa12.21□□□□□ -0.46
UBE2F-220ENST00000472479 DDX11Q96FC9 970 aa12.21□□□□□ -0.46
UBE2F-220ENST00000472479 CPVLQ9H3G5 476 aa12.21□□□□□ -0.46
UBE2F-220ENST00000472479 V9GY48 417 aaPredicted RBP12.21□□□□□ -0.46
UBE2F-220ENST00000472479 ATAD5Q96QE3 1844 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 PDHXO00330 501 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 AOC2O75106 756 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 SNHG28P0DPA3 235 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 HSPA6P17066 643 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 PLS1Q14651 629 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 CCDC174Q6PII3 467 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 CCAR1Q8IX12 1150 aaKnown RBP12.2□□□□□ -0.46
UBE2F-220ENST00000472479 ADGRF4Q8IZF3 695 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 CPXCR1Q8N123 301 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 SRBD1Q8N5C6 995 aaKnown RBP12.2□□□□□ -0.46
UBE2F-220ENST00000472479 BRI3BPQ8WY22 251 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 CWC22Q9HCG8 908 aaKnown RBP12.2□□□□□ -0.46
UBE2F-220ENST00000472479 FBXO28Q9NVF7 368 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 PRR12Q9ULL5 1215 aa12.2□□□□□ -0.46
UBE2F-220ENST00000472479 WDR33Q9C0J8 1336 aaKnown RBP12.19□□□□□ -0.46
UBE2F-220ENST00000472479 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 DTNBO60941 627 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 IFNAR1P17181 557 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 SNAP25P60880 206 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 HMGN5P82970 282 aaKnown RBP12.19□□□□□ -0.46
UBE2F-220ENST00000472479 TRIM29Q14134 588 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 ANKRD23Q86SG2 305 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 WASF1Q92558 559 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 MS4A4AQ96JQ5 239 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
UBE2F-220ENST00000472479 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
UBE2F-220ENST00000472479 PAGR1Q9BTK6 254 aa12.19□□□□□ -0.46
UBE2F-220ENST00000472479 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
UBE2F-220ENST00000472479 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
UBE2F-220ENST00000472479 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 FAM155AB1AL88 458 aaPredicted RBP12.18□□□□□ -0.46
UBE2F-220ENST00000472479 FDX1P10109 184 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 XBP1P17861 261 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 SMARCA1P28370 1054 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 HOXA7P31268 230 aaPredicted RBP12.18□□□□□ -0.46
UBE2F-220ENST00000472479 FOSBP53539 338 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 TRAF1Q13077 416 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 TAF1CQ15572 869 aaPredicted RBP12.18□□□□□ -0.46
UBE2F-220ENST00000472479 ATG4CQ96DT6 458 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 PIGSQ96S52 555 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 PARK7Q99497 189 aaKnown RBP12.18□□□□□ -0.46
UBE2F-220ENST00000472479 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 ASCC2Q9H1I8 757 aaPredicted RBP12.18□□□□□ -0.46
UBE2F-220ENST00000472479 JMJD4Q9H9V9 463 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 FAM217BQ9NTX9 383 aaPredicted RBP12.18□□□□□ -0.46
UBE2F-220ENST00000472479 PPP1R9AQ9ULJ8 1098 aa12.18□□□□□ -0.46
UBE2F-220ENST00000472479 MYH4Q9Y623 1939 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 PLA2G6O60733 806 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 FMNL1O95466 1100 aaPredicted RBP12.17□□□□□ -0.46
UBE2F-220ENST00000472479 CYP2C8P10632 490 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 VEGFBP49765 207 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 CDC37Q16543 378 aaPredicted RBP12.17□□□□□ -0.46
UBE2F-220ENST00000472479 GPAT2Q6NUI2 795 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 BTNL9Q6UXG8 535 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 NBPF11Q86T75 865 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 ZFYVE28Q9HCC9 887 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms