RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TMX3Q96JJ7 454 aa19.57■□□□□ 0.72
CCM2-205ENST00000472223 SEC63Q9UGP8 760 aaKnown RBP19.57■□□□□ 0.72
CCM2-205ENST00000472223 HPS5Q9UPZ3 1129 aa19.57■□□□□ 0.72
CCM2-205ENST00000472223 MYPNQ86TC9 1320 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 BTBD19C9JJ37 291 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 ZBED4O75132 1171 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 ADD1P35611 737 aaKnown RBP19.56■□□□□ 0.72
CCM2-205ENST00000472223 TM4SF4P48230 202 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 VEGFBP49765 207 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 HTRA3P83110 453 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 SCRN1Q12765 414 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 TRAF1Q13077 416 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 SYDE2Q5VT97 1194 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 TMTC3Q6ZXV5 915 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 STAG2Q8N3U4 1231 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 NECAB1Q8N987 351 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 SMCR8Q8TEV9 937 aaPredicted RBP19.56■□□□□ 0.72
CCM2-205ENST00000472223 RRP36Q96EU6 259 aaKnown RBP19.56■□□□□ 0.72
CCM2-205ENST00000472223 PARK7Q99497 189 aaKnown RBP19.56■□□□□ 0.72
CCM2-205ENST00000472223 UBA5Q9GZZ9 404 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 VAT1LQ9HCJ6 419 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 RBM27Q9P2N5 1060 aaKnown RBP19.56■□□□□ 0.72
CCM2-205ENST00000472223 PNMA2Q9UL42 364 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.56■□□□□ 0.72
CCM2-205ENST00000472223 NID2Q14112 1375 aa19.56■□□□□ 0.72
CCM2-205ENST00000472223 AOC2O75106 756 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 SLC16A2P36021 539 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 SSRP1Q08945 709 aaKnown RBP19.55■□□□□ 0.72
CCM2-205ENST00000472223 TTBK2Q6IQ55 1244 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 GPAT2Q6NUI2 795 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 BTNL9Q6UXG8 535 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 IFNL1Q8IU54 200 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 CCDC83Q8IWF9 413 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 CCDC82Q8N4S0 544 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 NCOA5Q9HCD5 579 aaKnown RBP19.55■□□□□ 0.72
CCM2-205ENST00000472223 PPP1R9AQ9ULJ8 1098 aa19.55■□□□□ 0.72
CCM2-205ENST00000472223 CD2BP2O95400 341 aaKnown RBP19.54■□□□□ 0.72
CCM2-205ENST00000472223 CDC27P30260 824 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 DSG3P32926 999 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 MOGSQ13724 837 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 RASGRP2Q7LDG7 609 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 MB21D1Q8N884 522 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 LLPHQ9BRT6 129 aaKnown RBP19.54■□□□□ 0.72
CCM2-205ENST00000472223 SPZ1Q9BXG8 430 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 ASCC2Q9H1I8 757 aaPredicted RBP19.54■□□□□ 0.72
CCM2-205ENST00000472223 TSHZ2Q9NRE2 1034 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 PRR12Q9ULL5 1215 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 KIF3AQ9Y496 699 aa19.54■□□□□ 0.72
CCM2-205ENST00000472223 PLEKHA8P1O95397 391 aa19.53■□□□□ 0.72
CCM2-205ENST00000472223 LARGE1O95461 756 aa19.53■□□□□ 0.72
CCM2-205ENST00000472223 IFNAR1P17181 557 aa19.53■□□□□ 0.72
CCM2-205ENST00000472223 TAF1CQ15572 869 aaPredicted RBP19.53■□□□□ 0.72
CCM2-205ENST00000472223 SRBD1Q8N5C6 995 aaKnown RBP19.53■□□□□ 0.72
CCM2-205ENST00000472223 WASF1Q92558 559 aa19.53■□□□□ 0.72
CCM2-205ENST00000472223 ZFYVE28Q9HCC9 887 aa19.53■□□□□ 0.72
CCM2-205ENST00000472223 GCLCP48506 637 aaPredicted RBP19.52■□□□□ 0.72
CCM2-205ENST00000472223 HERVK_113P62684 666 aa19.52■□□□□ 0.72
CCM2-205ENST00000472223 HOMER1Q86YM7 354 aa19.52■□□□□ 0.72
CCM2-205ENST00000472223 CMTR1Q8N1G2 835 aaKnown RBP19.52■□□□□ 0.72
CCM2-205ENST00000472223 FAM43AQ8N2R8 423 aa19.52■□□□□ 0.72
CCM2-205ENST00000472223 P2RX7Q99572 595 aaKnown RBP19.52■□□□□ 0.72
CCM2-205ENST00000472223 PTPN18Q99952 460 aa19.52■□□□□ 0.72
CCM2-205ENST00000472223 BEGAINQ9BUH8 593 aa19.52■□□□□ 0.72
CCM2-205ENST00000472223 SLC26A6Q9BXS9 759 aa19.52■□□□□ 0.72
CCM2-205ENST00000472223 RIOX1Q9H6W3 641 aa19.52■□□□□ 0.72
CCM2-205ENST00000472223 FBXO28Q9NVF7 368 aa19.52■□□□□ 0.72
CCM2-205ENST00000472223 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.72
CCM2-205ENST00000472223 HMGN5P82970 282 aaKnown RBP19.51■□□□□ 0.71
CCM2-205ENST00000472223 FAM184AQ8NB25 1140 aa19.51■□□□□ 0.71
CCM2-205ENST00000472223 PIBF1Q8WXW3 757 aa19.51■□□□□ 0.71
CCM2-205ENST00000472223 RNF26Q9BY78 433 aaPredicted RBP19.51■□□□□ 0.71
CCM2-205ENST00000472223 FAM217BQ9NTX9 383 aaPredicted RBP19.51■□□□□ 0.71
CCM2-205ENST00000472223 SMC3Q9UQE7 1217 aa19.51■□□□□ 0.71
CCM2-205ENST00000472223 V9GY48 417 aaPredicted RBP19.51■□□□□ 0.71
CCM2-205ENST00000472223 PNMA6FA0A0J9YX94 578 aa19.5■□□□□ 0.71
CCM2-205ENST00000472223 IGF2BP3O00425 579 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCM2-205ENST00000472223 VWA5AO00534 786 aa19.5■□□□□ 0.71
CCM2-205ENST00000472223 ZBTB5O15062 677 aa19.5■□□□□ 0.71
CCM2-205ENST00000472223 PRPF3O43395 683 aaKnown RBP19.5■□□□□ 0.71
CCM2-205ENST00000472223 XBP1P17861 261 aa19.5■□□□□ 0.71
CCM2-205ENST00000472223 CDC37Q16543 378 aaPredicted RBP19.5■□□□□ 0.71
CCM2-205ENST00000472223 CCAR1Q8IX12 1150 aaKnown RBP19.5■□□□□ 0.71
CCM2-205ENST00000472223 ATG4CQ96DT6 458 aa19.5■□□□□ 0.71
CCM2-205ENST00000472223 CPVLQ9H3G5 476 aa19.5■□□□□ 0.71
CCM2-205ENST00000472223 JMJD4Q9H9V9 463 aa19.5■□□□□ 0.71
CCM2-205ENST00000472223 SPDYE16A6NNV3 312 aaPredicted RBP19.49■□□□□ 0.71
CCM2-205ENST00000472223 DEXIO95424 95 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 FMNL1O95466 1100 aaPredicted RBP19.49■□□□□ 0.71
CCM2-205ENST00000472223 CYP2C8P10632 490 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 OAZ1P54368 228 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 MAP2K1Q02750 393 aaPredicted RBP19.49■□□□□ 0.71
CCM2-205ENST00000472223 PLS1Q14651 629 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 CCDC174Q6PII3 467 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 LBX2Q6XYB7 198 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 CPXCR1Q8N123 301 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 PHKBQ93100 1093 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 INTS4Q96HW7 963 aaKnown RBP19.49■□□□□ 0.71
CCM2-205ENST00000472223 PIGSQ96S52 555 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 PAGR1Q9BTK6 254 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms