RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CPXCR1Q8N123 301 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 NPLOC4Q8TAT6 608 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 APBA2Q99767 749 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 KRT23Q9C075 422 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 CNNM2Q9H8M5 875 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 SLC38A10Q9HBR0 1119 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
SYN3-211ENST00000472027 CTDP1Q9Y5B0 961 aaPredicted RBP10.78□□□□□ -0.68
SYN3-211ENST00000472027 RPTORQ8N122 1335 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 ATP2A1O14983 1001 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 PLA2G6O60733 806 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 COBLO75128 1261 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 SGPL1O95470 568 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 FDX1P10109 184 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 FCER1AP12319 257 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 ZKSCAN1P17029 563 aaPredicted RBP10.77□□□□□ -0.69
SYN3-211ENST00000472027 SLC4A3P48751 1232 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 CCDC178Q5BJE1 867 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 KIAA1211Q6ZU35 1233 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 RASGRP2Q7LDG7 609 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 ABRAQ8N0Z2 381 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 ZSCAN10Q96SZ4 725 aaPredicted RBP10.77□□□□□ -0.69
SYN3-211ENST00000472027 MMP19Q99542 508 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 ESYT1Q9BSJ8 1104 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 TEX13BQ9BXU2 312 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.69
SYN3-211ENST00000472027 PAK6Q9NQU5 681 aaPredicted RBP10.77□□□□□ -0.69
SYN3-211ENST00000472027 FLRT1Q9NZU1 646 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 RIPK3Q9Y572 518 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 PLXNB2O15031 1838 aa10.77□□□□□ -0.69
SYN3-211ENST00000472027 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 A0A0G2JMZ2 1700 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 DOCK3Q8IZD9 2030 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 PDHBP11177 359 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
SYN3-211ENST00000472027 COPB2P35606 906 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 OAZ1P54368 228 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 CACNB2Q08289 660 aaPredicted RBP10.76□□□□□ -0.69
SYN3-211ENST00000472027 TRDNQ13061 729 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 CCDC96Q2M329 555 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 MAP3K21Q5TCX8 1036 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 ERICH6BQ5W0A0 696 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 SNRNP48Q6IEG0 339 aaKnown RBP10.76□□□□□ -0.69
SYN3-211ENST00000472027 TTBK2Q6IQ55 1244 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 U2AF1L4Q8WU68 220 aaKnown RBP10.76□□□□□ -0.69
SYN3-211ENST00000472027 ANKS1AQ92625 1134 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 DEFB118Q96PH6 123 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 LSG1Q9H089 658 aaKnown RBP10.76□□□□□ -0.69
SYN3-211ENST00000472027 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.76□□□□□ -0.69
SYN3-211ENST00000472027 GPCPD1Q9NPB8 672 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 PPP4R2Q9NY27 417 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 SLC5A4Q9NY91 659 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 PRR12Q9ULL5 1215 aa10.76□□□□□ -0.69
SYN3-211ENST00000472027 RBM8AQ9Y5S9 174 aaKnown RBP10.76□□□□□ -0.69
SYN3-211ENST00000472027 FRMPD2Q68DX3 1309 aaPredicted RBP10.76□□□□□ -0.69
SYN3-211ENST00000472027 HTTP42858 3142 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 E7EWF7 191 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 TFRCP02786 760 aaKnown RBP10.75□□□□□ -0.69
SYN3-211ENST00000472027 SLC16A2P36021 539 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 SNAP25P60880 206 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 KCTD2Q14681 263 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 MFSD14CQ5VZR4 134 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 BTNL9Q6UXG8 535 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 CYB5R4Q7L1T6 521 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 ENAHQ8N8S7 591 aaPredicted RBP10.75□□□□□ -0.69
SYN3-211ENST00000472027 PNMA1Q8ND90 353 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 NCOA7Q8NI08 942 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 SHISA4Q96DD7 197 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 AGBL1Q96MI9 1066 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 UBAC1Q9BSL1 405 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 KAT14Q9H8E8 782 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 TAF6LQ9Y6J9 622 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 ZNF536O15090 1300 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 TNKSO95271 1327 aa10.75□□□□□ -0.69
SYN3-211ENST00000472027 CDC45O75419 566 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 IGHA2P01877 340 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 PGK2P07205 417 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 SNHG28P0DPA3 235 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 CAPN2P17655 700 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 CCND3P30281 292 aaPredicted RBP10.74□□□□□ -0.69
SYN3-211ENST00000472027 CYP2C19P33261 490 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 ZNF543Q08ER8 600 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 ZNF792Q3KQV3 632 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 OLFML2BQ68BL8 750 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 CCDC174Q6PII3 467 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 STOX1Q6ZVD7 989 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 CHST13Q8NET6 341 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 DDX11Q96FC9 970 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 MAML3Q96JK9 1138 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 CRISPLD2Q9H0B8 497 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 ANO2Q9NQ90 1003 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 DIS3Q9Y2L1 958 aaKnown RBP10.74□□□□□ -0.69
SYN3-211ENST00000472027 PARP14Q460N5 1801 aa10.74□□□□□ -0.69
SYN3-211ENST00000472027 GOLGA8HP0CJ92 632 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 NECTIN1Q15223 517 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 SEC23AQ15436 765 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 GPATCH4Q5T3I0 446 aaKnown RBP10.73□□□□□ -0.69
SYN3-211ENST00000472027 IFIT1BQ5T764 474 aaKnown RBP10.73□□□□□ -0.69
SYN3-211ENST00000472027 SYDE2Q5VT97 1194 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms