RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 ADD2P35612 726 aa23.85■■□□□ 1.41
CCDC78-208ENST00000471861 MFSD5Q6N075 450 aa23.85■■□□□ 1.41
CCDC78-208ENST00000471861 NUP133Q8WUM0 1156 aa23.85■■□□□ 1.41
CCDC78-208ENST00000471861 ATP8A2Q9NTI2 1148 aa23.85■■□□□ 1.41
CCDC78-208ENST00000471861 RAPGEFL1Q9UHV5 662 aa23.85■■□□□ 1.41
CCDC78-208ENST00000471861 ZBED9Q6R2W3 1325 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 SYNGAP1Q96PV0 1343 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 DNAJC25-GNG10A0A024R161 153 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 USP17L12C9JPN9 530 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 USP17L21D6R901 530 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 CDK7P50613 346 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 MAMDC4Q6UXC1 1216 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 KANSL2Q9H9L4 492 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 ZHX1Q9UKY1 873 aaPredicted RBP23.84■■□□□ 1.41
CCDC78-208ENST00000471861 RIPK3Q9Y572 518 aa23.84■■□□□ 1.41
CCDC78-208ENST00000471861 CSF2RAP15509 400 aa23.83■■□□□ 1.41
CCDC78-208ENST00000471861 CST5P28325 142 aaPredicted RBP23.83■■□□□ 1.41
CCDC78-208ENST00000471861 COPB2P35606 906 aa23.83■■□□□ 1.41
CCDC78-208ENST00000471861 MSL3Q8N5Y2 521 aaKnown RBP23.83■■□□□ 1.41
CCDC78-208ENST00000471861 FGD4Q96M96 766 aa23.83■■□□□ 1.41
CCDC78-208ENST00000471861 NUP88Q99567 741 aaPredicted RBP23.83■■□□□ 1.41
CCDC78-208ENST00000471861 GOPCQ9HD26 462 aa23.83■■□□□ 1.41
CCDC78-208ENST00000471861 FAM184BQ9ULE4 1060 aa23.83■■□□□ 1.41
CCDC78-208ENST00000471861 CCER2I3L3R5 266 aa23.82■■□□□ 1.4
CCDC78-208ENST00000471861 DUSP11O75319 330 aaKnown RBP23.82■■□□□ 1.4
CCDC78-208ENST00000471861 ADGRE1Q14246 886 aa23.82■■□□□ 1.4
CCDC78-208ENST00000471861 SNRNP48Q6IEG0 339 aaKnown RBP23.82■■□□□ 1.4
CCDC78-208ENST00000471861 PPM1EQ8WY54 764 aa23.82■■□□□ 1.4
CCDC78-208ENST00000471861 TEX13BQ9BXU2 312 aa23.82■■□□□ 1.4
CCDC78-208ENST00000471861 PRDM12Q9H4Q4 367 aa23.82■■□□□ 1.4
CCDC78-208ENST00000471861 CHD7Q9P2D1 2997 aa23.82■■□□□ 1.4
CCDC78-208ENST00000471861 ELP1O95163 1332 aa23.82■■□□□ 1.4
CCDC78-208ENST00000471861 PPIGQ13427 754 aaKnown RBP eCLIP23.81■■□□□ 1.4
CCDC78-208ENST00000471861 PAG1Q9NWQ8 432 aa23.81■■□□□ 1.4
CCDC78-208ENST00000471861 APBB1O00213 710 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 RAD21O60216 631 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 ASGR1P07306 291 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 ACRP10323 421 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 AKNAD1Q5T1N1 836 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 CTR9Q6PD62 1173 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 FAM126BQ8IXS8 530 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 CLASRPQ8N2M8 674 aaKnown RBP23.8■■□□□ 1.4
CCDC78-208ENST00000471861 GLT1D1Q96MS3 346 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 GAS2L1Q99501 681 aaPredicted RBP23.8■■□□□ 1.4
CCDC78-208ENST00000471861 SLF1Q9BQI6 1058 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 UPF3AQ9H1J1 476 aaKnown RBP23.8■■□□□ 1.4
CCDC78-208ENST00000471861 MROH7Q68CQ1 1323 aa23.8■■□□□ 1.4
CCDC78-208ENST00000471861 CTAGE5O15320 804 aa23.79■■□□□ 1.4
CCDC78-208ENST00000471861 C6orf222P0C671 652 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-208ENST00000471861 ACVR2BQ13705 512 aa23.79■■□□□ 1.4
CCDC78-208ENST00000471861 HSP90AB4PQ58FF6 505 aa23.79■■□□□ 1.4
CCDC78-208ENST00000471861 CCDC129Q6ZRS4 1044 aa23.79■■□□□ 1.4
CCDC78-208ENST00000471861 ZNF365Q70YC5 407 aa23.79■■□□□ 1.4
CCDC78-208ENST00000471861 ATXN2LQ8WWM7 1075 aaKnown RBP23.79■■□□□ 1.4
CCDC78-208ENST00000471861 PPP1R12CQ9BZL4 782 aa23.79■■□□□ 1.4
CCDC78-208ENST00000471861 BOLA2Q9H3K6 86 aa23.79■■□□□ 1.4
CCDC78-208ENST00000471861 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-208ENST00000471861 THEGQ9P2T0 379 aa23.79■■□□□ 1.4
CCDC78-208ENST00000471861 MCM3APO60318 1980 aa23.78■■□□□ 1.4
CCDC78-208ENST00000471861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.78■■□□□ 1.4
CCDC78-208ENST00000471861 ZNF467Q7Z7K2 595 aaPredicted RBP23.78■■□□□ 1.4
CCDC78-208ENST00000471861 KIF1BPQ96EK5 621 aa23.78■■□□□ 1.4
CCDC78-208ENST00000471861 ASB2Q96Q27 587 aa23.78■■□□□ 1.4
CCDC78-208ENST00000471861 A0A0U1RQG5 324 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-208ENST00000471861 ARVCFO00192 962 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 IFIT2P09913 472 aaKnown RBP23.77■■□□□ 1.4
CCDC78-208ENST00000471861 GJA9P57773 515 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 CCDC144BQ3MJ40 725 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 PSRC1Q6PGN9 363 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-208ENST00000471861 PANK1Q8TE04 598 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 ADAMTS19Q8TE59 1207 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 DDX11Q96FC9 970 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 KATNBL1Q9H079 304 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 CXXC1Q9P0U4 656 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-208ENST00000471861 SLC4A4Q9Y6R1 1079 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 XIRP2A4UGR9 3374 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 REV3LO60673 3130 aa23.77■■□□□ 1.4
CCDC78-208ENST00000471861 MYH7P12883 1935 aa23.76■■□□□ 1.39
CCDC78-208ENST00000471861 ATP2A1O14983 1001 aa23.76■■□□□ 1.39
CCDC78-208ENST00000471861 NDUFB10O96000 172 aa23.76■■□□□ 1.39
CCDC78-208ENST00000471861 SIRT2Q8IXJ6 389 aa23.76■■□□□ 1.39
CCDC78-208ENST00000471861 AMOTL1Q8IY63 956 aa23.76■■□□□ 1.39
CCDC78-208ENST00000471861 TMEM199Q8N511 208 aa23.76■■□□□ 1.39
CCDC78-208ENST00000471861 PCSK9Q8NBP7 692 aaKnown RBP23.76■■□□□ 1.39
CCDC78-208ENST00000471861 PUS7LQ9H0K6 701 aaKnown RBP23.76■■□□□ 1.39
CCDC78-208ENST00000471861 GBF1Q92538 1859 aa23.76■■□□□ 1.39
CCDC78-208ENST00000471861 CD4P01730 458 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 RASA1P20936 1047 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 CYP2C18P33260 490 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 UBE3CQ15386 1083 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 CCDC174Q6PII3 467 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 ARMCX2Q7L311 632 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 CPXCR1Q8N123 301 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 BCL11AQ9H165 835 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 ABHD16BQ9H3Z7 469 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 YBX2Q9Y2T7 364 aaKnown RBP23.75■■□□□ 1.39
CCDC78-208ENST00000471861 UMODL1Q5DID0 1318 aa23.75■■□□□ 1.39
CCDC78-208ENST00000471861 F5H6K3 240 aa23.74■■□□□ 1.39
CCDC78-208ENST00000471861 ATP5JP18859 108 aa23.74■■□□□ 1.39
CCDC78-208ENST00000471861 KLRC3Q07444 240 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms