RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 AIFM3Q96NN9 605 aa22.27■■□□□ 1.16
PSPC1-203ENST00000471658 SPZ1Q9BXG8 430 aa22.27■■□□□ 1.16
PSPC1-203ENST00000471658 FEM1BQ9UK73 627 aa22.27■■□□□ 1.16
PSPC1-203ENST00000471658 PRPF3O43395 683 aaKnown RBP22.26■■□□□ 1.15
PSPC1-203ENST00000471658 ZBTB48P10074 688 aaPredicted RBP22.26■■□□□ 1.15
PSPC1-203ENST00000471658 APLP1P51693 650 aa22.26■■□□□ 1.15
PSPC1-203ENST00000471658 STAT2P52630 851 aa22.26■■□□□ 1.15
PSPC1-203ENST00000471658 PKN1Q16512 942 aa22.26■■□□□ 1.15
PSPC1-203ENST00000471658 GPAT2Q6NUI2 795 aa22.26■■□□□ 1.15
PSPC1-203ENST00000471658 CATSPERGQ6ZRH7 1159 aa22.26■■□□□ 1.15
PSPC1-203ENST00000471658 HOMER1Q86YM7 354 aa22.26■■□□□ 1.15
PSPC1-203ENST00000471658 PROCA1Q8NCQ7 364 aaPredicted RBP22.26■■□□□ 1.15
PSPC1-203ENST00000471658 PIGSQ96S52 555 aa22.26■■□□□ 1.15
PSPC1-203ENST00000471658 PRR12Q9ULL5 1215 aa22.26■■□□□ 1.15
PSPC1-203ENST00000471658 FAM155AB1AL88 458 aaPredicted RBP22.25■■□□□ 1.15
PSPC1-203ENST00000471658 SLC10A3P09131 477 aa22.25■■□□□ 1.15
PSPC1-203ENST00000471658 SMARCA1P28370 1054 aa22.25■■□□□ 1.15
PSPC1-203ENST00000471658 CHURC1Q8WUH1 139 aa22.25■■□□□ 1.15
PSPC1-203ENST00000471658 BRI3BPQ8WY22 251 aa22.25■■□□□ 1.15
PSPC1-203ENST00000471658 RNF26Q9BY78 433 aaPredicted RBP22.25■■□□□ 1.15
PSPC1-203ENST00000471658 FLOT1O75955 427 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 GTF2A2P52657 109 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 FOSBP53539 338 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 TRIM22Q8IYM9 498 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 CCL15-CCL14A0A0B4J2E2 113 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L15C9J2P7 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L13C9JLJ4 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L11C9JVI0 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L18D6R9N7 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L22D6RA61 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L17D6RBQ6 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L19D6RCP7 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L20D6RJB6 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 PLA2G6O60733 806 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 HMGN5P82970 282 aaKnown RBP22.24■■□□□ 1.15
PSPC1-203ENST00000471658 USP17L24Q0WX57 530 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 GRM1Q13255 1194 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 CCL15Q16663 113 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 CYP4F22Q6NT55 531 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 FASTKD5Q7L8L6 764 aaKnown RBP22.24■■□□□ 1.15
PSPC1-203ENST00000471658 FAM160B2Q86V87 743 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 FAM184AQ8NB25 1140 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 GJB4Q9NTQ9 266 aa22.24■■□□□ 1.15
PSPC1-203ENST00000471658 CETPP11597 493 aa22.23■■□□□ 1.15
PSPC1-203ENST00000471658 HTRA3P83110 453 aa22.23■■□□□ 1.15
PSPC1-203ENST00000471658 AKAP17AQ02040 695 aaKnown RBP22.23■■□□□ 1.15
PSPC1-203ENST00000471658 PAXIP1Q6ZW49 1069 aaPredicted RBP22.23■■□□□ 1.15
PSPC1-203ENST00000471658 MTMR8Q96EF0 704 aa22.23■■□□□ 1.15
PSPC1-203ENST00000471658 SLF1Q9BQI6 1058 aa22.23■■□□□ 1.15
PSPC1-203ENST00000471658 CREBZFQ9NS37 354 aa22.23■■□□□ 1.15
PSPC1-203ENST00000471658 AGTPBP1Q9UPW5 1226 aa22.23■■□□□ 1.15
PSPC1-203ENST00000471658 STK36Q9NRP7 1315 aa22.23■■□□□ 1.15
PSPC1-203ENST00000471658 LOC285556D6RIA3 1793 aa22.22■■□□□ 1.15
PSPC1-203ENST00000471658 DEXIO95424 95 aa22.22■■□□□ 1.15
PSPC1-203ENST00000471658 SHISA4Q96DD7 197 aa22.22■■□□□ 1.15
PSPC1-203ENST00000471658 ATG4CQ96DT6 458 aa22.22■■□□□ 1.15
PSPC1-203ENST00000471658 RRP36Q96EU6 259 aaKnown RBP22.22■■□□□ 1.15
PSPC1-203ENST00000471658 HHIPL1Q96JK4 782 aa22.22■■□□□ 1.15
PSPC1-203ENST00000471658 ZIC5Q96T25 663 aa22.22■■□□□ 1.15
PSPC1-203ENST00000471658 PTPN18Q99952 460 aa22.22■■□□□ 1.15
PSPC1-203ENST00000471658 PPP1R9AQ9ULJ8 1098 aa22.22■■□□□ 1.15
PSPC1-203ENST00000471658 BTBD19C9JJ37 291 aa22.21■■□□□ 1.15
PSPC1-203ENST00000471658 PPP1R11O60927 126 aaPredicted RBP22.21■■□□□ 1.15
PSPC1-203ENST00000471658 TAL1P17542 331 aaPredicted RBP22.21■■□□□ 1.15
PSPC1-203ENST00000471658 HOXA7P31268 230 aaPredicted RBP22.21■■□□□ 1.15
PSPC1-203ENST00000471658 CDC37Q16543 378 aaPredicted RBP22.21■■□□□ 1.15
PSPC1-203ENST00000471658 OTUD7BQ6GQQ9 843 aa22.21■■□□□ 1.15
PSPC1-203ENST00000471658 PRPF38AQ8NAV1 312 aaKnown RBP22.21■■□□□ 1.15
PSPC1-203ENST00000471658 GPKOWQ92917 476 aaPredicted RBP eCLIP22.21■■□□□ 1.15
PSPC1-203ENST00000471658 CCDC102AQ96A19 550 aa22.21■■□□□ 1.15
PSPC1-203ENST00000471658 ALG1Q9BT22 464 aa22.21■■□□□ 1.15
PSPC1-203ENST00000471658 DSG3P32926 999 aa22.2■■□□□ 1.15
PSPC1-203ENST00000471658 COG2Q14746 738 aa22.2■■□□□ 1.15
PSPC1-203ENST00000471658 PFKFB3Q16875 520 aaPredicted RBP22.2■■□□□ 1.15
PSPC1-203ENST00000471658 QRICH1Q2TAL8 776 aa22.2■■□□□ 1.15
PSPC1-203ENST00000471658 DEFB115Q30KQ5 88 aa22.2■■□□□ 1.15
PSPC1-203ENST00000471658 CCDC174Q6PII3 467 aa22.2■■□□□ 1.15
PSPC1-203ENST00000471658 P2RX7Q99572 595 aaKnown RBP22.2■■□□□ 1.15
PSPC1-203ENST00000471658 CWC22Q9HCG8 908 aaKnown RBP22.2■■□□□ 1.15
PSPC1-203ENST00000471658 SCG2P13521 617 aa22.2■■□□□ 1.14
PSPC1-203ENST00000471658 DDIT3P35638 169 aa22.2■■□□□ 1.14
PSPC1-203ENST00000471658 GUCY1B3Q02153 619 aa22.2■■□□□ 1.14
PSPC1-203ENST00000471658 POTEEQ6S8J3 1075 aa22.2■■□□□ 1.14
PSPC1-203ENST00000471658 ASCC2Q9H1I8 757 aaPredicted RBP22.2■■□□□ 1.14
PSPC1-203ENST00000471658 RANBP17Q9H2T7 1088 aaKnown RBP22.2■■□□□ 1.14
PSPC1-203ENST00000471658 PNMA6FA0A0J9YX94 578 aa22.19■■□□□ 1.14
PSPC1-203ENST00000471658 ZBTB5O15062 677 aa22.19■■□□□ 1.14
PSPC1-203ENST00000471658 LARP1BQ659C4 914 aaKnown RBP22.19■■□□□ 1.14
PSPC1-203ENST00000471658 WWC2Q6AWC2 1192 aa22.19■■□□□ 1.14
PSPC1-203ENST00000471658 FAM43AQ8N2R8 423 aa22.19■■□□□ 1.14
PSPC1-203ENST00000471658 COA7Q96BR5 231 aa22.19■■□□□ 1.14
PSPC1-203ENST00000471658 VPS54Q9P1Q0 977 aa22.19■■□□□ 1.14
PSPC1-203ENST00000471658 SEC63Q9UGP8 760 aaKnown RBP22.19■■□□□ 1.14
PSPC1-203ENST00000471658 TESPA1A2RU30 521 aaPredicted RBP22.18■■□□□ 1.14
PSPC1-203ENST00000471658 RASSF10A6NK89 507 aa22.18■■□□□ 1.14
PSPC1-203ENST00000471658 SPDYE16A6NNV3 312 aaPredicted RBP22.18■■□□□ 1.14
PSPC1-203ENST00000471658 PDHXO00330 501 aa22.18■■□□□ 1.14
PSPC1-203ENST00000471658 PEX10O60683 326 aa22.18■■□□□ 1.14
PSPC1-203ENST00000471658 SYT1P21579 422 aa22.18■■□□□ 1.14
PSPC1-203ENST00000471658 PKP1Q13835 747 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms