RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 KCTD2Q14681 263 aa27.72■■■□□ 2.03
RNF220-208ENST00000471494 HIP1O00291 1037 aa27.71■■■□□ 2.03
RNF220-208ENST00000471494 EVI5O60447 810 aa27.71■■■□□ 2.03
RNF220-208ENST00000471494 ZBED4O75132 1171 aa27.71■■■□□ 2.03
RNF220-208ENST00000471494 LHX8Q68G74 356 aa27.71■■■□□ 2.03
RNF220-208ENST00000471494 SNRNP48Q6IEG0 339 aaKnown RBP27.71■■■□□ 2.03
RNF220-208ENST00000471494 C11orf49Q9H6J7 331 aa27.71■■■□□ 2.03
RNF220-208ENST00000471494 MSCO60682 206 aa27.7■■■□□ 2.02
RNF220-208ENST00000471494 RRP12Q5JTH9 1297 aaKnown RBP27.7■■■□□ 2.02
RNF220-208ENST00000471494 GMCL1Q96IK5 515 aa27.7■■■□□ 2.02
RNF220-208ENST00000471494 DDX20Q9UHI6 824 aaKnown RBP27.7■■■□□ 2.02
RNF220-208ENST00000471494 TACC3Q9Y6A5 838 aa27.7■■■□□ 2.02
RNF220-208ENST00000471494 NMT2O60551 498 aa27.69■■■□□ 2.02
RNF220-208ENST00000471494 IGHA2P01877 340 aa27.69■■■□□ 2.02
RNF220-208ENST00000471494 FGRP09769 529 aa27.69■■■□□ 2.02
RNF220-208ENST00000471494 CYBAP13498 195 aa27.69■■■□□ 2.02
RNF220-208ENST00000471494 MNX1P50219 401 aaPredicted RBP27.69■■■□□ 2.02
RNF220-208ENST00000471494 HAND2P61296 217 aa27.69■■■□□ 2.02
RNF220-208ENST00000471494 CWC27Q6UX04 472 aaKnown RBP27.69■■■□□ 2.02
RNF220-208ENST00000471494 CPXCR1Q8N123 301 aa27.69■■■□□ 2.02
RNF220-208ENST00000471494 MAML3Q96JK9 1138 aa27.69■■■□□ 2.02
RNF220-208ENST00000471494 IL17RBQ9NRM6 502 aa27.69■■■□□ 2.02
RNF220-208ENST00000471494 ATP2A1O14983 1001 aa27.68■■■□□ 2.02
RNF220-208ENST00000471494 SLC1A4P43007 532 aa27.68■■■□□ 2.02
RNF220-208ENST00000471494 SLC4A3P48751 1232 aa27.68■■■□□ 2.02
RNF220-208ENST00000471494 IKQ13123 557 aaPredicted RBP27.68■■■□□ 2.02
RNF220-208ENST00000471494 SLC38A10Q9HBR0 1119 aa27.68■■■□□ 2.02
RNF220-208ENST00000471494 SLC34A2O95436 690 aa27.67■■■□□ 2.02
RNF220-208ENST00000471494 PGK2P07205 417 aa27.67■■■□□ 2.02
RNF220-208ENST00000471494 STAT2P52630 851 aa27.67■■■□□ 2.02
RNF220-208ENST00000471494 HABP4Q5JVS0 413 aaKnown RBP27.67■■■□□ 2.02
RNF220-208ENST00000471494 TRPV1Q8NER1 839 aa27.67■■■□□ 2.02
RNF220-208ENST00000471494 CHMP4CQ96CF2 233 aa27.67■■■□□ 2.02
RNF220-208ENST00000471494 TRIOBPQ9H2D6 2365 aa27.67■■■□□ 2.02
RNF220-208ENST00000471494 TMEM232C9JQI7 657 aa27.66■■■□□ 2.02
RNF220-208ENST00000471494 MCCP23508 829 aa27.66■■■□□ 2.02
RNF220-208ENST00000471494 FAM160B2Q86V87 743 aa27.66■■■□□ 2.02
RNF220-208ENST00000471494 CHURC1Q8WUH1 139 aa27.66■■■□□ 2.02
RNF220-208ENST00000471494 RAVER2Q9HCJ3 691 aaKnown RBP27.66■■■□□ 2.02
RNF220-208ENST00000471494 FDX1P10109 184 aa27.65■■■□□ 2.02
RNF220-208ENST00000471494 PCP11498 1178 aaKnown RBP27.65■■■□□ 2.02
RNF220-208ENST00000471494 PDE4AP27815 886 aa27.65■■■□□ 2.02
RNF220-208ENST00000471494 OAZ1P54368 228 aa27.65■■■□□ 2.02
RNF220-208ENST00000471494 COLQQ9Y215 455 aaPredicted RBP27.65■■■□□ 2.02
RNF220-208ENST00000471494 DIS3Q9Y2L1 958 aaKnown RBP27.65■■■□□ 2.02
RNF220-208ENST00000471494 SMCHD1A6NHR9 2005 aa27.64■■■□□ 2.02
RNF220-208ENST00000471494 AKNAD1Q5T1N1 836 aa27.64■■■□□ 2.02
RNF220-208ENST00000471494 MFSD6Q6ZSS7 791 aa27.64■■■□□ 2.02
RNF220-208ENST00000471494 STAG1Q8WVM7 1258 aa27.64■■■□□ 2.02
RNF220-208ENST00000471494 RNF41Q9H4P4 317 aaPredicted RBP27.64■■■□□ 2.02
RNF220-208ENST00000471494 MTMR7Q9Y216 660 aa27.64■■■□□ 2.02
RNF220-208ENST00000471494 RIPK3Q9Y572 518 aa27.64■■■□□ 2.02
RNF220-208ENST00000471494 PFASO15067 1338 aa27.64■■■□□ 2.01
RNF220-208ENST00000471494 NOVP48745 357 aa27.63■■■□□ 2.01
RNF220-208ENST00000471494 ZNF792Q3KQV3 632 aa27.63■■■□□ 2.01
RNF220-208ENST00000471494 CHRDL2Q6WN34 429 aa27.63■■■□□ 2.01
RNF220-208ENST00000471494 TBC1D10CQ8IV04 446 aa27.63■■■□□ 2.01
RNF220-208ENST00000471494 DDX11Q96FC9 970 aa27.63■■■□□ 2.01
RNF220-208ENST00000471494 SEPT4O43236 478 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 COL6A1P12109 1028 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 CCDC96Q2M329 555 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 TTC22Q5TAA0 569 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 RCSD1Q6JBY9 416 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 KCTD1Q719H9 257 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 C7orf61Q8IZ16 206 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 TINF2Q9BSI4 451 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 FBXO40Q9UH90 709 aa27.62■■■□□ 2.01
RNF220-208ENST00000471494 MCM3APO60318 1980 aa27.61■■■□□ 2.01
RNF220-208ENST00000471494 ZNF213O14771 459 aa27.61■■■□□ 2.01
RNF220-208ENST00000471494 PLA2G6O60733 806 aa27.61■■■□□ 2.01
RNF220-208ENST00000471494 TOP1P11387 765 aaKnown RBP27.61■■■□□ 2.01
RNF220-208ENST00000471494 PRAMEF19Q5SWL8 479 aa27.61■■■□□ 2.01
RNF220-208ENST00000471494 CHST13Q8NET6 341 aa27.61■■■□□ 2.01
RNF220-208ENST00000471494 DCAF4Q8WV16 495 aa27.61■■■□□ 2.01
RNF220-208ENST00000471494 TCP11L1Q9NUJ3 509 aa27.61■■■□□ 2.01
RNF220-208ENST00000471494 NRBP1Q9UHY1 535 aa27.61■■■□□ 2.01
RNF220-208ENST00000471494 RASGRP2Q7LDG7 609 aa27.6■■■□□ 2.01
RNF220-208ENST00000471494 DSCC1Q9BVC3 393 aa27.6■■■□□ 2.01
RNF220-208ENST00000471494 GSPT1P15170 499 aaKnown RBP27.59■■■□□ 2.01
RNF220-208ENST00000471494 ANO1Q5XXA6 986 aa27.59■■■□□ 2.01
RNF220-208ENST00000471494 ANKRD35Q8N283 1001 aa27.59■■■□□ 2.01
RNF220-208ENST00000471494 ESR2Q92731 530 aa27.59■■■□□ 2.01
RNF220-208ENST00000471494 TMEM47Q9BQJ4 181 aa27.59■■■□□ 2.01
RNF220-208ENST00000471494 HOMER2Q9NSB8 354 aa27.59■■■□□ 2.01
RNF220-208ENST00000471494 NEDD4P46934 1319 aa27.59■■■□□ 2.01
RNF220-208ENST00000471494 DNM1LO00429 736 aa27.58■■■□□ 2.01
RNF220-208ENST00000471494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.58■■■□□ 2.01
RNF220-208ENST00000471494 ARRDC4Q8NCT1 418 aa27.58■■■□□ 2.01
RNF220-208ENST00000471494 PRR12Q9ULL5 1215 aa27.58■■■□□ 2.01
RNF220-208ENST00000471494 DNAJC25-GNG10A0A024R161 153 aa27.57■■■□□ 2
RNF220-208ENST00000471494 MSL3Q8N5Y2 521 aaKnown RBP27.57■■■□□ 2
RNF220-208ENST00000471494 ACAD9Q9H845 621 aa27.57■■■□□ 2
RNF220-208ENST00000471494 CTNNA3Q9UI47 895 aa27.57■■■□□ 2
RNF220-208ENST00000471494 CNPY2Q9Y2B0 182 aa27.57■■■□□ 2
RNF220-208ENST00000471494 KBTBD13C9JR72 458 aa27.56■■■□□ 2
RNF220-208ENST00000471494 NT5C2P49902 561 aa27.56■■■□□ 2
RNF220-208ENST00000471494 IMMTQ16891 758 aaKnown RBP27.56■■■□□ 2
RNF220-208ENST00000471494 CCDC174Q6PII3 467 aa27.56■■■□□ 2
RNF220-208ENST00000471494 AGBL1Q96MI9 1066 aa27.56■■■□□ 2
RNF220-208ENST00000471494 TTC14Q96N46 770 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms