RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 SLC9C1Q4G0N8 1177 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 RRP12Q5JTH9 1297 aaKnown RBP9.06□□□□□ -0.96
TRIM59-204ENST00000471396 FAM83BQ5T0W9 1011 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 ERICH6BQ5W0A0 696 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 MFSD6Q6ZSS7 791 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 MB21D1Q8N884 522 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 GMCL1P1Q8NEA9 526 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 RAET1EQ8TD07 263 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 MKL1Q969V6 931 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 HOXC10Q9NYD6 342 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 NEDD4P46934 1319 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 F5H6K3 240 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 NOVP48745 357 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 KLRC3Q07444 240 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 IRF5Q13568 498 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 CCAR1Q8IX12 1150 aaKnown RBP9.05□□□□□ -0.96
TRIM59-204ENST00000471396 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 SOCS4Q8WXH5 440 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 ESR2Q92731 530 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 ATG4CQ96DT6 458 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 ZNF333Q96JL9 665 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 NUP88Q99567 741 aaPredicted RBP9.05□□□□□ -0.96
TRIM59-204ENST00000471396 PORCNQ9H237 461 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 IL17RBQ9NRM6 502 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 BTBD7Q9P203 1132 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 PPP1R9AQ9ULJ8 1098 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 GABRQQ9UN88 632 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 STX8Q9UNK0 236 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
TRIM59-204ENST00000471396 PLXNB2O15031 1838 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 CEP290O15078 2479 aa9.05□□□□□ -0.96
TRIM59-204ENST00000471396 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
TRIM59-204ENST00000471396 COL11A1P12107 1806 aaPredicted RBP9.04□□□□□ -0.96
TRIM59-204ENST00000471396 ZNF236Q9UL36 1845 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 NMT2O60551 498 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 GRK4P32298 578 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 SOX10P56693 466 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 Q3C1V9 767 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 SLFN13Q68D06 897 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 GPR142Q7Z601 462 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 PLEKHH3Q7Z736 793 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 NBPF11Q86T75 865 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 SHCBP1Q8NEM2 672 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 GMCL1Q96IK5 515 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 SLF1Q9BQI6 1058 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 CWC22Q9HCG8 908 aaKnown RBP9.04□□□□□ -0.96
TRIM59-204ENST00000471396 TCP11L1Q9NUJ3 509 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 FBXO28Q9NVF7 368 aa9.04□□□□□ -0.96
TRIM59-204ENST00000471396 ADCY3O60266 1144 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 TOP1P11387 765 aaKnown RBP9.03□□□□□ -0.96
TRIM59-204ENST00000471396 BMP3P12645 472 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 PTH1RQ03431 593 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 NKX2-3Q8TAU0 364 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 NUDT12Q9BQG2 462 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 MOV10L1Q9BXT6 1211 aaKnown RBP9.03□□□□□ -0.96
TRIM59-204ENST00000471396 SPATC1LQ9H0A9 340 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 PPP4R2Q9NY27 417 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 FEM1BQ9UK73 627 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 GJD2Q9UKL4 321 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 ISY1Q9ULR0 285 aaKnown RBP9.03□□□□□ -0.96
TRIM59-204ENST00000471396 ADAMTS5Q9UNA0 930 aa9.03□□□□□ -0.96
TRIM59-204ENST00000471396 CENPFP49454 3210 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 B4E1Z4 1266 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 VWA5AO00534 786 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 DPYSL4O14531 572 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 KDM4AO75164 1064 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 CDC45O75419 566 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 HMGCRP04035 888 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 INHAP05111 366 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 ELNP15502 786 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 PTPREP23469 700 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 COPB2P35606 906 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 RGS2P41220 211 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 SLC1A4P43007 532 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 STAT2P52630 851 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 UBXN2AP68543 259 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 GRB14Q14449 540 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 PLS1Q14651 629 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 TMEM132BQ14DG7 1078 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 CCDC178Q5BJE1 867 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 MORN1Q5T089 497 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 WDR78Q5VTH9 848 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 KIAA1211Q6ZU35 1233 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 RASGRP2Q7LDG7 609 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 FAM160B2Q86V87 743 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 IQCA1Q86XH1 822 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 REPS2Q8NFH8 660 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 DCAF4Q8WV16 495 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 USP6NLQ92738 828 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 APBA2Q99767 749 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 TMEM47Q9BQJ4 181 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 KRT23Q9C075 422 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 ZNF214Q9UL59 606 aaPredicted RBP9.02□□□□□ -0.97
TRIM59-204ENST00000471396 IVNS1ABPQ9Y6Y0 642 aa9.02□□□□□ -0.97
TRIM59-204ENST00000471396 SLC15A5A6NIM6 579 aa9.01□□□□□ -0.97
TRIM59-204ENST00000471396 SLC25A27O95847 323 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms