RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 XIRP1Q702N8 1843 aaKnown RBP8.47□□□□□ -1.05
GTF2B-204ENST00000471296 ATP7BP35670 1465 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 IGF2BP3O00425 579 aaKnown RBP eCLIP8.47□□□□□ -1.05
GTF2B-204ENST00000471296 JUNBP17275 347 aaPredicted RBP8.47□□□□□ -1.05
GTF2B-204ENST00000471296 ETF1P62495 437 aaKnown RBP8.47□□□□□ -1.05
GTF2B-204ENST00000471296 TMF1P82094 1093 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 NKPD1Q17RQ9 610 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 KCT2Q8NC54 265 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 PI4K2BQ8TCG2 481 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 ASIC4Q96FT7 647 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 WNT10AQ9GZT5 417 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 RC3H2Q9HBD1 1191 aaKnown RBP8.47□□□□□ -1.05
GTF2B-204ENST00000471296 PRDM7Q9NQW5 492 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 PARP2Q9UGN5 583 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 SPATA31A6Q5VVP1 1343 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 BRD4O60885 1362 aaPredicted RBP8.47□□□□□ -1.05
GTF2B-204ENST00000471296 NINLQ9Y2I6 1382 aa8.47□□□□□ -1.05
GTF2B-204ENST00000471296 ST20-MTHFSA0A0A6YYL1 179 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 LRIG2O94898 1065 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 PDIA4P13667 645 aaKnown RBP8.46□□□□□ -1.06
GTF2B-204ENST00000471296 NPAS4Q8IUM7 802 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 NGDNQ8NEJ9 315 aaKnown RBP8.46□□□□□ -1.06
GTF2B-204ENST00000471296 FAM161BQ96MY7 647 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 FOXQ1Q9C009 403 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 PRDM5Q9NQX1 630 aaPredicted RBP8.46□□□□□ -1.06
GTF2B-204ENST00000471296 PRR36Q9H6K5 1346 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 KIF1AQ12756 1690 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 SBNO1A3KN83 1393 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 FMN2Q9NZ56 1722 aa8.46□□□□□ -1.06
GTF2B-204ENST00000471296 PRR33A8MZF0 331 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 GRK4P32298 578 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 ZEB1P37275 1124 aaPredicted RBP8.45□□□□□ -1.06
GTF2B-204ENST00000471296 LIG3P49916 1009 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 ANGEL2Q5VTE6 544 aaKnown RBP8.45□□□□□ -1.06
GTF2B-204ENST00000471296 OGFOD2Q6N063 350 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 DNAJC14Q6Y2X3 702 aaPredicted RBP8.45□□□□□ -1.06
GTF2B-204ENST00000471296 LRRN4CLQ8ND94 238 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 RIN3Q8TB24 985 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 XAGE3Q8WTP9 111 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 MIPEPQ99797 713 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 SNX11Q9Y5W9 270 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 SNCAIPQ9Y6H5 919 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 ARHGEF10O15013 1369 aa8.45□□□□□ -1.06
GTF2B-204ENST00000471296 GNAT3A8MTJ3 354 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 LMNB1P20700 586 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 RPS26P62854 115 aaKnown RBP8.44□□□□□ -1.06
GTF2B-204ENST00000471296 IKZF1Q13422 519 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 AGMOQ6ZNB7 445 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 KRT28Q7Z3Y7 464 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 PMFBP1Q8TBY8 1022 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 TLR6Q9Y2C9 796 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 POLR3AO14802 1390 aaPredicted RBP8.44□□□□□ -1.06
GTF2B-204ENST00000471296 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 PPIP5K1Q6PFW1 1433 aa8.44□□□□□ -1.06
GTF2B-204ENST00000471296 F6X3S4 739 aa8.43□□□□□ -1.06
GTF2B-204ENST00000471296 GFRA2O00451 464 aa8.43□□□□□ -1.06
GTF2B-204ENST00000471296 CTSHP09668 335 aa8.43□□□□□ -1.06
GTF2B-204ENST00000471296 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
GTF2B-204ENST00000471296 TAGLNQ01995 201 aaKnown RBP8.43□□□□□ -1.06
GTF2B-204ENST00000471296 PSMD2Q13200 908 aa8.43□□□□□ -1.06
GTF2B-204ENST00000471296 PRAMEF13Q5VWM6 474 aa8.43□□□□□ -1.06
GTF2B-204ENST00000471296 HDGFL2Q7Z4V5 671 aaPredicted RBP8.43□□□□□ -1.06
GTF2B-204ENST00000471296 TESK2Q96S53 571 aa8.43□□□□□ -1.06
GTF2B-204ENST00000471296 TPX2Q9ULW0 747 aaKnown RBP8.43□□□□□ -1.06
GTF2B-204ENST00000471296 PNPLA6Q8IY17 1366 aa8.43□□□□□ -1.06
GTF2B-204ENST00000471296 PXDNQ92626 1479 aa8.43□□□□□ -1.06
GTF2B-204ENST00000471296 COL16A1Q07092 1604 aaPredicted RBP8.43□□□□□ -1.06
GTF2B-204ENST00000471296 DAB2P98082 770 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 FGD1P98174 961 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 HID1Q8IV36 788 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 DPH2Q9BQC3 489 aaPredicted RBP8.42□□□□□ -1.06
GTF2B-204ENST00000471296 TERF2IPQ9NYB0 399 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 MAPK8IP1Q9UQF2 711 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
GTF2B-204ENST00000471296 ACEP12821 1306 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 SPATA31A3Q5VYP0 1347 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 NHSL1Q5SYE7 1610 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 QRICH2Q9H0J4 1663 aa8.42□□□□□ -1.06
GTF2B-204ENST00000471296 PHLPP1O60346 1717 aa8.41□□□□□ -1.06
GTF2B-204ENST00000471296 PITPNM2Q9BZ72 1349 aa8.41□□□□□ -1.06
GTF2B-204ENST00000471296 HSPA5P11021 654 aaKnown RBP8.41□□□□□ -1.06
GTF2B-204ENST00000471296 ZP2Q05996 745 aa8.41□□□□□ -1.06
GTF2B-204ENST00000471296 MEX3CQ5U5Q3 659 aaKnown RBP8.41□□□□□ -1.06
GTF2B-204ENST00000471296 ATG4DQ86TL0 474 aaPredicted RBP8.41□□□□□ -1.06
GTF2B-204ENST00000471296 ASB11Q8WXH4 323 aa8.41□□□□□ -1.06
GTF2B-204ENST00000471296 JARID2Q92833 1246 aaPredicted RBP8.41□□□□□ -1.06
GTF2B-204ENST00000471296 DDX17Q92841 729 aaKnown RBP8.41□□□□□ -1.06
GTF2B-204ENST00000471296 MIR1-1HGQ9H1L0 117 aa8.41□□□□□ -1.06
GTF2B-204ENST00000471296 TTC21AQ8NDW8 1320 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 BTBD11A6QL63 1104 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 BIN1O00499 593 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 CAP2P40123 477 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 XPCQ01831 940 aaPredicted RBP8.4□□□□□ -1.06
GTF2B-204ENST00000471296 SFRP5Q5T4F7 317 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 CDKAL1Q5VV42 579 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 LETMD1Q6P1Q0 360 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 SLC23A3Q6PIS1 610 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 FBXO33Q7Z6M2 555 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 MFSD2AQ8NA29 543 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 HSPA12BQ96MM6 686 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms