RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 YIPF2Q9BWQ6 316 aa8.02□□□□□ -1.13
CKS1B-204ENST00000471245 SPATA9Q9BWV2 254 aa8.02□□□□□ -1.13
CKS1B-204ENST00000471245 SLKQ9H2G2 1235 aaPredicted RBP8.02□□□□□ -1.13
CKS1B-204ENST00000471245 LEMD3Q9Y2U8 911 aa8.02□□□□□ -1.13
CKS1B-204ENST00000471245 C3P01024 1663 aa8.02□□□□□ -1.13
CKS1B-204ENST00000471245 PRXQ9BXM0 1461 aa8.01□□□□□ -1.13
CKS1B-204ENST00000471245 ANKRD34BA5PLL1 514 aa8.01□□□□□ -1.13
CKS1B-204ENST00000471245 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
CKS1B-204ENST00000471245 TMEM67Q5HYA8 995 aa8.01□□□□□ -1.13
CKS1B-204ENST00000471245 PPP1R13LQ8WUF5 828 aa8.01□□□□□ -1.13
CKS1B-204ENST00000471245 HAUS7Q99871 368 aa8.01□□□□□ -1.13
CKS1B-204ENST00000471245 FAM83CQ9BQN1 747 aa8.01□□□□□ -1.13
CKS1B-204ENST00000471245 RAXQ9Y2V3 346 aa8.01□□□□□ -1.13
CKS1B-204ENST00000471245 AGRPO00253 132 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 GAS2O43903 313 aaKnown RBP8□□□□□ -1.13
CKS1B-204ENST00000471245 ADCY3O60266 1144 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 BMP3P12645 472 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 USP11P51784 963 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 RNF4P78317 190 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 FAM9AQ8IZU1 332 aaPredicted RBP8□□□□□ -1.13
CKS1B-204ENST00000471245 DNAJB8Q8NHS0 232 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 SLC26A8Q96RN1 970 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 BRINP2Q9C0B6 783 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 SUSD2Q9UGT4 822 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 IQSEC2Q5JU85 1478 aa8□□□□□ -1.13
CKS1B-204ENST00000471245 C9IYK1 514 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 PTPRTO14522 1441 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 RAB6AP20340 208 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 CEBPAP49715 358 aaPredicted RBP7.99□□□□□ -1.13
CKS1B-204ENST00000471245 TCEA2Q15560 299 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 TDRD10Q5VZ19 366 aaKnown RBP7.99□□□□□ -1.13
CKS1B-204ENST00000471245 UHRF1BP1Q6BDS2 1440 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 ZBTB38Q8NAP3 1195 aaPredicted RBP7.99□□□□□ -1.13
CKS1B-204ENST00000471245 KLHL25Q9H0H3 589 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 SEMA6CQ9H3T2 930 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 STOML1Q9UBI4 398 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 CEP131Q9UPN4 1083 aa7.99□□□□□ -1.13
CKS1B-204ENST00000471245 MYO5CQ9NQX4 1742 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 C9orf84Q5VXU9 1444 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 CCDC163A0A0D9SF12 145 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 CBFA2T2O43439 604 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 DYRK3O43781 588 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 EPHX1P07099 455 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 ANKRD39Q53RE8 183 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 AXDND1Q5T1B0 1012 aaPredicted RBP7.98□□□□□ -1.13
CKS1B-204ENST00000471245 HEATR6Q6AI08 1181 aaKnown RBP7.98□□□□□ -1.13
CKS1B-204ENST00000471245 XAGE3Q8WTP9 111 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 APBA2Q99767 749 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 ATP10AO60312 1499 aa7.98□□□□□ -1.13
CKS1B-204ENST00000471245 GSC2O15499 205 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 FAM153BP0C7A2 387 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 MAP4P27816 1152 aaKnown RBP7.97□□□□□ -1.13
CKS1B-204ENST00000471245 ETV3P41162 512 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 MAP7Q14244 749 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 PTPROQ16827 1216 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 NBPF12Q5TAG4 269 aaPredicted RBP7.97□□□□□ -1.13
CKS1B-204ENST00000471245 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 LETMD1Q6P1Q0 360 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 BEND4Q6ZU67 534 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 KRTAP1-3Q8IUG1 177 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 CCDC144CPQ8IYA2 1237 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 ZCRB1Q8TBF4 217 aaKnown RBP7.97□□□□□ -1.13
CKS1B-204ENST00000471245 VWCEQ96DN2 955 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 KREMEN1Q96MU8 473 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 MIPEPQ99797 713 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 ASPNQ9BXN1 380 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 MKRN2Q9H000 416 aaKnown RBP7.97□□□□□ -1.13
CKS1B-204ENST00000471245 GBP3Q9H0R5 595 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 DAGLAQ9Y4D2 1042 aa7.97□□□□□ -1.13
CKS1B-204ENST00000471245 A0A1W2PQU0 124 aa7.96□□□□□ -1.14
CKS1B-204ENST00000471245 PPP1R12AO14974 1030 aaPredicted RBP7.96□□□□□ -1.14
CKS1B-204ENST00000471245 TP53P04637 393 aaPredicted RBP7.96□□□□□ -1.14
CKS1B-204ENST00000471245 FURINP09958 794 aa7.96□□□□□ -1.14
CKS1B-204ENST00000471245 SV2CQ496J9 727 aa7.96□□□□□ -1.14
CKS1B-204ENST00000471245 RNF141Q8WVD5 230 aa7.96□□□□□ -1.14
CKS1B-204ENST00000471245 GPATCH3Q96I76 525 aa7.96□□□□□ -1.14
CKS1B-204ENST00000471245 SPC25Q9HBM1 224 aa7.96□□□□□ -1.14
CKS1B-204ENST00000471245 WHRNQ9P202 907 aa7.96□□□□□ -1.14
CKS1B-204ENST00000471245 PLAAQ9Y263 795 aa7.96□□□□□ -1.14
CKS1B-204ENST00000471245 SCAPERQ9BY12 1400 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 SUPT6HQ7KZ85 1726 aaKnown RBP7.95□□□□□ -1.14
CKS1B-204ENST00000471245 FAM95CA0A1B0GW59 222 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 PLEKHD1A6NEE1 506 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 SHOXO15266 292 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 DNAJC6O75061 913 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 SLITRK5O94991 958 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 NFICP08651 508 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 GYS2P54840 703 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 TKFCQ3LXA3 575 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 SGO2Q562F6 1265 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 DCAF15Q66K64 600 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 RNF43Q68DV7 783 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 SEZ6L2Q6UXD5 910 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 FILIP1Q7Z7B0 1213 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 C7orf61Q8IZ16 206 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 ZNF513Q8N8E2 541 aaPredicted RBP7.95□□□□□ -1.14
CKS1B-204ENST00000471245 ZNF512BQ96KM6 892 aaPredicted RBP7.95□□□□□ -1.14
CKS1B-204ENST00000471245 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 CWC22Q9HCG8 908 aaKnown RBP7.95□□□□□ -1.14
CKS1B-204ENST00000471245 PRDM10Q9NQV6 1147 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms